RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 PATE4P0C8F1 98 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 ACVR1Q04771 509 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 DCAF10Q5QP82 559 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 DNM1P46Q6ZS02 220 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 MMD2Q8IY49 270 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 MRGPRFQ96AM1 343 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 CNRIP1Q96F85 164 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-209ENST00000635750 MARS2Q96GW9 593 aaKnown RBP4.85□□□□□ -1.63
SCN1A-209ENST00000635750 NRIP2Q9BQI9 281 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 WNT5BQ9H1J7 359 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 MYO5AQ9Y4I1 1855 aaKnown RBP4.85□□□□□ -1.63
SCN1A-209ENST00000635750 FBLL1A6NHQ2 334 aaKnown RBP4.85□□□□□ -1.63
SCN1A-209ENST00000635750 PLPP2O43688 288 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 IL4P05112 153 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 CSF2RBP32927 897 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 PPP1R1AQ13522 171 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 RAB32Q13637 225 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 PRSS42Q7Z5A4 293 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 ZNF680Q8NEM1 530 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 ZNF385DQ9H6B1 395 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 PLCH1Q4KWH8 1693 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 PSCAO43653 123 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 CTAG2O75638 210 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 ZP3P21754 424 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 SLC16A13Q7RTY0 426 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 MRGPRGQ86SM5 289 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 GAPTQ8N292 157 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 MTURNQ8N3F0 131 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 SIGLEC7Q9Y286 467 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 MYO7BQ6PIF6 2116 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 PPIAL4CA0A0B4J2A2 164 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 TRBV7-9A0A0J9YWB2 115 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 B4E171 279 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 DIRC3C9JPN6 131 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 DLL1O00548 723 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 LILRA1O75019 489 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 LIPFP07098 398 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 FTH1P19P0C7X4 201 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 PPIAL4GP0DN37 164 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 AANATQ16613 207 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 STHQ8IWL8 128 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 MBD3L1Q8WWY6 194 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 PLA2G2FQ9BZM2 168 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 RNF167Q9H6Y7 350 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 KMT2EQ8IZD2 1858 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 ALX3O95076 343 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 IGKV3-20P01619 116 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 CGB2Q6NT52 195 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 LRRC3BQ96PB8 259 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 IL20Q9NYY1 176 aa4.85□□□□□ -1.63
SCN1A-209ENST00000635750 ARAP2Q8WZ64 1704 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 TRGV2A0A075B6R0 118 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 TRAV8-7A0A075B6U6 113 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 PPYP01298 95 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 RPL8P62917 257 aaKnown RBP4.84□□□□□ -1.63
SCN1A-209ENST00000635750 SURF2Q15527 256 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-209ENST00000635750 TMEM136Q6ZRR5 245 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 SPAG8Q99932 426 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-209ENST00000635750 PRR19A6NJB7 356 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 TMEM250H0YL14 139 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 EDIL3O43854 480 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 GDF9O60383 454 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 MPC2O95563 127 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 NAT2P11245 290 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 CDKN2AP42771 156 aaKnown RBP4.84□□□□□ -1.63
SCN1A-209ENST00000635750 PLP1P60201 277 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 FAM24BQ8N5W8 94 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 TMEM174Q8WUU8 243 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 CCL13Q99616 98 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 TTTY12Q9BZ98 90 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 TSPAN7P41732 249 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 SELENOPP49908 381 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 PLPPR5Q32ZL2 321 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 RGP1Q92546 391 aaPredicted RBP4.84□□□□□ -1.63
SCN1A-209ENST00000635750 MRPL24Q96A35 216 aaKnown RBP4.84□□□□□ -1.63
SCN1A-209ENST00000635750 SOSTQ9BQB4 213 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 MTFP1Q9UDX5 166 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 FOCADQ5VW36 1801 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 TRAV39A0A0B4J263 110 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 A0A1W2PQD3 144 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 LNP1A1A4G5 178 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 C7orf66A4D0T2 115 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 FUNDC1Q8IVP5 155 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 ZNF645Q8N7E2 425 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 AMER3Q8N944 861 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 FAM168AQ92567 244 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 TMEM45BQ96B21 275 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 PGLYRP3Q96LB9 341 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 ATAD5Q96QE3 1844 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 ETHE1O95571 254 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 CD1AP06126 327 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 LIFP15018 202 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 UCP2P55851 309 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 LINC01587Q99440 93 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 SIRT7Q9NRC8 400 aa4.84□□□□□ -1.63
SCN1A-209ENST00000635750 CTXND1A0A1B0GTU2 59 aa4.84□□□□□ -1.64
SCN1A-209ENST00000635750 A1L4Q6 167 aa4.84□□□□□ -1.64
SCN1A-209ENST00000635750 LIPT2A6NK58 231 aa4.84□□□□□ -1.64
SCN1A-209ENST00000635750 VSIG10L2P0DP72 767 aa4.84□□□□□ -1.64
SCN1A-209ENST00000635750 MFAP2P55001 183 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms