RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 OR2T35Q8NGX2 323 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 NEU4Q8WWR8 484 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 GALNT14Q96FL9 552 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 HYLS1Q96M11 299 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 GPHA2Q96T91 129 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 CTSZQ9UBR2 303 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 SLC25A10Q9UBX3 287 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 CDC42EP3Q9UKI2 254 aa7.85□□□□□ -1.15
PDLIM5-223ENST00000627587 MXRA5Q9NR99 2828 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 TRGV10A0A0A0MS01 117 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 CCSO14618 274 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 HSD17B6O14756 317 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 ADAM20O43506 726 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 FAM157CP0CG43 387 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 NDUFB7P17568 137 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 RND3P61587 244 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 HTD2P86397 168 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 RFESDQ8TAC1 157 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 TMEM246Q9BRR3 403 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 PDCD10Q9BUL8 212 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 SUCNR1Q9BXA5 334 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 TOLLIPQ9H0E2 274 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 OR2S2Q9NQN1 319 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 CCL28Q9NRJ3 127 aa7.84□□□□□ -1.15
PDLIM5-223ENST00000627587 MPTX1A8MV57 137 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 FAM25EA8MYX2 175 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 MPPED1O15442 326 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 NDUFB3O43676 98 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 FSTL3O95633 263 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 IGHV4-39P01824 125 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 OR5AC1P0C628 307 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 OR8U9P0C7N5 309 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 CDKN1AP38936 164 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 MRPS11P82912 194 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 SRSF4Q08170 494 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 C17orf58Q2M2W7 97 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 LRRC10Q5BKY1 277 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 LAMTOR1Q6IAA8 161 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 TBC1D26Q86UD7 250 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 DRAXINQ8NBI3 349 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 MAPK1IP1LQ8NDC0 245 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 BVESQ8NE79 360 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 OR52L2PQ8NGH6 319 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 OR8U1Q8NH10 309 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 C5orf30Q96GV9 206 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 RAB18Q9NP72 206 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 CALYQ9NYX4 217 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 KAAG1Q9UBP8 84 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 JPT1Q9UK76 154 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 C3orf85A0A1B0GTC6 90 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 hADV38S2A0JD32 116 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 C5orf51A6NDU8 294 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 PHF1O43189 567 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 ADAP1O75689 374 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 RGS11O94810 467 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 SLC25A16P16260 332 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 PPP1CCP36873 323 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 LOXL3P58215 753 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 LOXL1Q08397 574 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 TMEM187Q14656 261 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 LTC4SQ16873 150 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 SP6Q3SY56 376 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 CLEC2AQ6UVW9 174 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 GSG1LQ6UXU4 331 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 LHFPL5Q8TAF8 219 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 GLYATL2Q8WU03 294 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 AKR1E2Q96JD6 320 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 TP53RKQ96S44 253 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 METTL8Q9H825 291 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 PLSCR3Q9NRY6 295 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 GNG12Q9UBI6 72 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 KCNS2Q9ULS6 477 aa7.83□□□□□ -1.16
PDLIM5-223ENST00000627587 ABCA1O95477 2261 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 CR1P17927 2039 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 STAB1Q9NY15 2570 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 IGHV3-43A0A0B4J1X8 118 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 KBTBD11-OT1A0A1B0GTJ5 212 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 C13orf42A0A1B0GVH6 325 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 ZNF729A6NN14 1252 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 F2RL2O00254 374 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 IGHV2-70P01814 119 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 IGHV3-43DP0DP04 118 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 DAOP14920 347 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 RPL31P62899 125 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 SRPXP78539 464 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 MEF2CQ06413 473 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 LIAT1Q6ZQX7 453 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 LGI3Q8N145 548 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 EDARADDQ8WWZ3 215 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 CORO2AQ92828 525 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 MSI2Q96DH6 328 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 TIMD4Q96H15 378 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 AGMATQ9BSE5 352 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 CLN8Q9UBY8 286 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 UBE2J1Q9Y385 318 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 LINC00312Q9Y6C7 94 aa7.82□□□□□ -1.16
PDLIM5-223ENST00000627587 TRAV14DV4A0A0A6YYC5 116 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 DVL1O14640 695 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 TNFSF12O43508 249 aa7.81□□□□□ -1.16
PDLIM5-223ENST00000627587 YPEL1O60688 119 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms