RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 ZZEF1O43149 2961 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 USF3Q68DE3 2245 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 A0A1B0GU03 582 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 ZNF705EA8MWA4 302 aaPredicted RBP16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 CHST1O43916 411 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 PVALBP20472 110 aaPredicted RBP16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 LINC00205P59089 165 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 UBAC2Q8NBM4 344 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 PSG11Q9UQ72 335 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 RNF115Q9Y4L5 304 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 KIAA1324LA8MWY0 1029 aaPredicted RBP16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 OMGP23515 440 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 LPAR6P43657 344 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 VAMP2P63027 116 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 KLRB1Q12918 225 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 MST1LQ2TV78 715 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 STUMQ69YW2 141 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 TRAT1Q6PIZ9 186 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 STPG2Q8N412 459 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 NEUROG1Q92886 237 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 LYRM2Q9NU23 88 aaPredicted RBP16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 LPAR3Q9UBY5 353 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 GZMHP20718 246 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 PAX9P55771 341 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 HTD2P86397 168 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 TMEM252Q8N6L7 170 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 ZBTB34Q8NCN2 500 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 Q8TCH9 128 aa16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 LSM10Q969L4 123 aaKnown RBP16.33■□□□□ 0.2
CHRNA4-209ENST00000627000 POLEQ07864 2286 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 RNF212BA8MTL3 300 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 C17orf100A8MU93 164 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 IGHV3-7P01780 117 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 GYPAP02724 150 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 C1QTNF9P0C862 333 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 BRWD1-AS2P59051 145 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 CCL13Q99616 98 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 AGMATQ9BSE5 352 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 ARV1Q9H2C2 271 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 SPTA1P02549 2419 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 DSCAML1Q8TD84 2053 aa16.32■□□□□ 0.2
CHRNA4-209ENST00000627000 C17orf98A8MV24 154 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 WRBO00258 174 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 ADH4P08319 380 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 SLC25A6P12236 298 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 CA7P43166 264 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 ZNF816Q0VGE8 651 aaPredicted RBP16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 CR1LQ2VPA4 569 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 UTF1Q5T230 341 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 EIF5AL1Q6IS14 154 aaKnown RBP16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 ZNF295-AS1Q8N0V1 137 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 ZNF561Q8N587 486 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 MARC2Q969Z3 335 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 GAFA1Q96PS6 74 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 GNG12Q9UBI6 72 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 SIGLEC5O15389 551 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 SULT1A2P50226 295 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 CLINT1Q14677 625 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 Q3ZCU0 254 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 DMRTC2Q8IXT2 367 aaPredicted RBP16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 FGFRL1Q8N441 504 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 FAM216BQ8N7L0 139 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 TCTEX1D2Q8WW35 142 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 SDSLQ96GA7 329 aa16.31■□□□□ 0.2
CHRNA4-209ENST00000627000 BORCS7-ASMTA0A0B4J1R7 106 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 FAM90A27PA6NNH2 459 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 SHISA9B4DS77 424 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 MED6O75586 246 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 CST7O76096 145 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 CASP6P55212 293 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 MORN2Q502X0 79 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 KDF1Q8NAX2 398 aaPredicted RBP16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 SH3BGRL3Q9H299 93 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 ATRXP46100 2492 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 RELNP78509 3460 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 TANC2Q9HCD6 1990 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 PIGBOS1A0A0B4J2F0 54 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 LINC00473A8K010 186 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 H3BP45 60 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 IRF2P14316 349 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 LOXL3P58215 753 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 TLE1Q04724 770 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 SSX8Q7RTT4 187 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 HSD17B11Q8NBQ5 300 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 C14orf79Q96F83 325 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 SMIM8Q96KF7 97 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 CALYQ9NYX4 217 aa16.3■□□□□ 0.2
CHRNA4-209ENST00000627000 E7EQL1 145 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 CCL21O00585 134 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 PROP1O75360 226 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 S1PR2O95136 353 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 CLDN1O95832 211 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 CGB3P0DN86 165 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 CGB7P0DN87 165 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 GRNP28799 593 aaKnown RBP16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 C17orf58Q2M2W7 97 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 NCMAPQ5T1S8 102 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 SPAG16Q8N0X2 631 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 BPIFCQ8NFQ6 507 aa16.29■□□□□ 0.2
CHRNA4-209ENST00000627000 GINS3Q9BRX5 216 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms