RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 I3L521 148 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 EBAG9O00559 213 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 MYL12BO14950 172 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 TXNL1O43396 289 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 RRP9O43818 475 aaKnown RBP8.88□□□□□ -0.99
CPNE3-210ENST00000621245 LINC00205P59089 165 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 QRFPP83859 136 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 RPL39P5Q59GN2 51 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 C19orf54Q5BKX5 351 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 UNQ9370/PRO34162Q6UXP9 181 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 GLDNQ6ZMI3 551 aaPredicted RBP8.88□□□□□ -0.99
CPNE3-210ENST00000621245 PACRGLQ8N7B6 248 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 SETD9Q8NE22 299 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 OR11H1Q8NG94 326 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 OR8H1Q8NGG4 311 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 OR5M8Q8NGP6 311 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 TMED9Q9BVK6 235 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 SSBP4Q9BWG4 385 aaPredicted RBP8.88□□□□□ -0.99
CPNE3-210ENST00000621245 ANKRD60Q9BZ19 345 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 CNOT2Q9NZN8 540 aaKnown RBP8.88□□□□□ -0.99
CPNE3-210ENST00000621245 JPT1Q9UK76 154 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 GAB2Q9UQC2 676 aa8.88□□□□□ -0.99
CPNE3-210ENST00000621245 LSM2Q9Y333 95 aaKnown RBP8.88□□□□□ -0.99
CPNE3-210ENST00000621245 ANKRD65E5RJM6 399 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 IGLV1-40P01703 118 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 HLA-DRB1P01911 266 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 TAS2R43P59537 309 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 RPS27AP62979 156 aaKnown RBP8.87□□□□□ -0.99
CPNE3-210ENST00000621245 GABPB1Q06547 395 aaPredicted RBP8.87□□□□□ -0.99
CPNE3-210ENST00000621245 C5orf64Q2M2E5 130 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 TMEM30BQ3MIR4 351 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 ZNF260Q3ZCT1 412 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 ACSM3Q53FZ2 586 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 RBM48Q5RL73 367 aaKnown RBP8.87□□□□□ -0.99
CPNE3-210ENST00000621245 C9orf66Q5T8R8 295 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 OGFRL1Q5TC84 451 aaPredicted RBP8.87□□□□□ -0.99
CPNE3-210ENST00000621245 TRAT1Q6PIZ9 186 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 FAM131AQ6UXB0 335 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 CDH26Q8IXH8 852 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 C8orf59Q8N0T1 100 aaPredicted RBP8.87□□□□□ -0.99
CPNE3-210ENST00000621245 NKAIN3Q8N8D7 197 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 ZNF491Q8N8L2 437 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 WWC2-AS2Q96NR7 200 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 UQCC2Q9BRT2 126 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 OR51J1Q9H342 316 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 FBXL15Q9H469 300 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 PLCXD1Q9NUJ7 323 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 OR1A1Q9P1Q5 309 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 ZNF580Q9UK33 172 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 U3KQE9 123 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 TENM2Q9NT68 2774 aa8.87□□□□□ -0.99
CPNE3-210ENST00000621245 BIRC6Q9NR09 4857 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 TRAV41A0A0B4J266 112 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 FCN1O00602 326 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 NBR2O15453 112 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 SOCS1O15524 211 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 YPEL1O60688 119 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 CA11O75493 328 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 NDUFA3O95167 84 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 NAPSAO96009 420 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 CD1AP06126 327 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 GLAP06280 429 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 CDK1P06493 297 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 CT45A6P0DMU7 189 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 CT45A5P0DMU8 189 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 CT45A7P0DMV0 189 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 EGR2P11161 476 aaPredicted RBP8.86□□□□□ -0.99
CPNE3-210ENST00000621245 SLURP1P55000 103 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 HTD2P86397 168 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 PLA2G7Q13093 441 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 MED21Q13503 144 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 P2RY14Q15391 338 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 ECSCRQ19T08 205 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 C1orf100Q5SVJ3 147 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 ZNF880Q6PDB4 577 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 IL1F10Q8WWZ1 152 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 ABHD14BQ96IU4 210 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 YPEL2Q96QA6 119 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 TPSG1Q9NRR2 321 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 A3GALT2U3KPV4 340 aa8.86□□□□□ -0.99
CPNE3-210ENST00000621245 FOXI3A8MTJ6 420 aaPredicted RBP8.85□□□□□ -0.99
CPNE3-210ENST00000621245 TMEM14DPA8MWL7 114 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 CASQ2O14958 399 aaPredicted RBP8.85□□□□□ -0.99
CPNE3-210ENST00000621245 SLC22A1O15245 554 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 PROP1O75360 226 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 SCGB1D2O95969 90 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 STEAP3Q658P3 488 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 HAPLN4Q86UW8 402 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 MINDY2Q8NBR6 621 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 NPBQ8NG41 125 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 OR2AK2Q8NG84 335 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 OR1N2Q8NGR9 330 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 SETD6Q8TBK2 473 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 DCUN1D4Q92564 292 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 FAM103A1Q9BTL3 118 aaKnown RBP8.85□□□□□ -0.99
CPNE3-210ENST00000621245 TM2D1Q9BX74 207 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 TMEM59Q9BXS4 323 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 GON7Q9BXV9 100 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 LPAR5Q9H1C0 372 aa8.85□□□□□ -0.99
CPNE3-210ENST00000621245 KCNIP1Q9NZI2 227 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms