RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 MTCH1Q9NZJ7 389 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CLCF1Q9UBD9 225 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ERRFI1Q9UJM3 462 aaPredicted RBP9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CACNA1GO43497 2377 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 BCL3P20749 454 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 MDH2P40926 338 aaKnown RBP9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PLGLB1Q02325 96 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ICAM4Q14773 271 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 ETFRF1Q6IPR1 90 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 SLC25A26Q70HW3 274 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR4X1Q8NH49 305 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 FAM103A1Q9BTL3 118 aaKnown RBP9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 OR51I2Q9H344 312 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PAM16Q9Y3D7 125 aa9.22□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 LOC102724200A0A096LPH7 203 aaPredicted RBP9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 C5orf49A4QMS7 147 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CD300LBA8K4G0 201 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TRDCB7Z8K6 153 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 CLDN34H7C241 214 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 PPYP01298 95 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 GZMBP10144 247 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 UBE2G2P60604 165 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 IGFBP7Q16270 282 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 Q8IYB0 196 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 EXTL1Q92935 676 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 TMEM222Q9H0R3 208 aa9.21□□□□□ -0.93
SENP3-EIF4A1-201ENST00000614237 GRIFINA4D1Z8 144 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 NPSP0C0P6 89 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 NPBWR2P48146 333 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SPCS3P61009 180 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ERVK11-1P61568 191 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 GNG3P63215 75 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 C1orf174Q8IYL3 243 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TMEM252Q8N6L7 170 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 C1orf162Q8NEQ5 155 aaPredicted RBP9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SCGB1C1Q8TD33 95 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 GINS3Q9BRX5 216 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SPRR3Q9UBC9 169 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TRGV5A0A0B4J1U4 118 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 LRP5LA4QPB2 252 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PPP5D1E7EU14 171 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 MPPED1O15442 326 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 IFNA5P01569 189 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 S100A7P31151 101 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TNFSF10P50591 281 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 RNF151Q2KHN1 245 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ZNF766Q5HY98 468 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PRR31Q5SQ13 230 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 KDF1Q8NAX2 398 aaPredicted RBP9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 GATAD1Q8WUU5 269 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ZNF552Q9H707 407 aaPredicted RBP9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SLC25A22Q9H936 323 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SELENOKQ9Y6D0 94 aa9.21□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 FAM166BA8MTA8 275 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 K7N7A8 449 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PAX5Q02548 391 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 GABRA6Q16445 453 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SPANXN5Q5MJ07 72 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 OR5B12Q96R08 314 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SCRT1Q9BWW7 348 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SNHG12Q9BXW3 62 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 STRAPQ9Y3F4 350 aaKnown RBP9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TCF21O43680 179 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 GLIPR1P48060 266 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 FOXG1P55316 489 aaPredicted RBP9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ZNF266Q14584 549 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 MSMO1Q15800 293 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SPSB3Q6PJ21 355 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TOMM20LQ6UXN7 152 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 MOB1BQ7L9L4 216 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 C16orf82Q7Z2V1 217 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 FAM169BQ8N8A8 192 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 POLEQ07864 2286 aa9.2□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PGPEP1LA6NFU8 196 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ZNF732B4DXR9 585 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TRAPPC2LH3BP13 241 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 H7BYZ3 331 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 AQP7O14520 342 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 DVL1O14640 695 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TGOLN2O43493 480 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 CRYAAP02489 173 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 CCL2P13500 99 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SELEP16581 610 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TNFRSF9Q07011 255 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TRIP6Q15654 476 aaKnown RBP9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 HIKESHIQ53FT3 197 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 MCEMP1Q8IX19 187 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 MRPL30Q8TCC3 161 aaKnown RBP9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 C3orf85A0A1B0GTC6 90 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 A0A1B0GW64 132 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SLC22A20A6NK97 555 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ANKRD30BLA7E2S9 258 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 CEACAM4O75871 244 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 UCP1P25874 307 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 GNB2P62879 340 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SRYQ05066 204 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 Q6P435 159 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TEX38Q6PEX7 206 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms