RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 FGFRL1Q8N441 504 aa17.29■□□□□ 0.36
SSBP3-216ENST00000610401 H7BYZ3 331 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 PAGE4O60829 102 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 FGF5P12034 268 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 PLGLB1Q02325 96 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 PLP2Q04941 152 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 OR10A7Q8NGE5 316 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 A0A087WWC5 75 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 GALR1P47211 349 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 CD81P60033 236 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 FOXO1Q12778 655 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 ACSM6Q6P461 480 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 PPP1R32Q7Z5V6 425 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 M1APQ8TC57 530 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 TNRC18O15417 2968 aaPredicted RBP17.28■□□□□ 0.36
SSBP3-216ENST00000610401 A0A1B0GW64 132 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 WNT9BO14905 357 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 GATCO43716 136 aaKnown RBP17.28■□□□□ 0.36
SSBP3-216ENST00000610401 NXPH2O95156 264 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 PMS2P11Q13670 270 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 WDR54Q9H977 334 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 TCFL5Q9UL49 500 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 POLEQ07864 2286 aa17.28■□□□□ 0.36
SSBP3-216ENST00000610401 ARFGEF3Q5TH69 2177 aa17.27■□□□□ 0.36
SSBP3-216ENST00000610401 MT-CO3P00414 261 aa17.27■□□□□ 0.36
SSBP3-216ENST00000610401 IL11RAQ14626 422 aa17.27■□□□□ 0.36
SSBP3-216ENST00000610401 ZNF585BQ52M93 769 aa17.27■□□□□ 0.36
SSBP3-216ENST00000610401 TIPARPQ7Z3E1 657 aaKnown RBP17.27■□□□□ 0.36
SSBP3-216ENST00000610401 RAB40CQ96S21 281 aa17.27■□□□□ 0.36
SSBP3-216ENST00000610401 SIRT7Q9NRC8 400 aa17.27■□□□□ 0.36
SSBP3-216ENST00000610401 ADAMTS20P59510 1910 aa17.27■□□□□ 0.36
SSBP3-216ENST00000610401 PPP5D1E7EU14 171 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 HBG1P69891 147 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 HBG2P69892 147 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 BSXQ3C1V8 233 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 MRPL41Q8IXM3 137 aaKnown RBP17.27■□□□□ 0.35
SSBP3-216ENST00000610401 OR52L2PQ8NGH6 319 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 OR13D1Q8NGV5 346 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 OR1L1Q8NH94 360 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 DEFB127Q9H1M4 99 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 OR2D2Q9H210 308 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 OPA3Q9H6K4 179 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 VAX2Q9UIW0 290 aa17.27■□□□□ 0.35
SSBP3-216ENST00000610401 YKT6O15498 198 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 ZG16O60844 167 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 AMBPP02760 352 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 G0S2P27469 103 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 WNT5AP41221 380 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 GNB2P62879 340 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 TMEM241Q24JQ0 296 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 GCNT2Q8N0V5 402 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 KCNE4Q8WWG9 221 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 TAF15Q92804 592 aaKnown RBP eCLIP17.26■□□□□ 0.356e-7■■■■□ 20.6
SSBP3-216ENST00000610401 APOBEC3DQ96AK3 386 aaPredicted RBP17.26■□□□□ 0.35
SSBP3-216ENST00000610401 PARLQ9H300 379 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 OR2H2O95918 312 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 FGF7P21781 194 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 DRAM1Q8N682 238 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 OR5B12Q96R08 314 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 DERL1Q9BUN8 251 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 SMDT1Q9H4I9 107 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 SH2D2AQ9NP31 389 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 CISD1Q9NZ45 108 aaKnown RBP17.26■□□□□ 0.35
SSBP3-216ENST00000610401 IGLV2-14P01704 120 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 OR3A1P47881 315 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 TRIM61Q5EBN2 209 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 FFAR4Q5NUL3 377 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 TDHQ8IZJ6 230 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 APH1AQ96BI3 265 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 ABHD14BQ96IU4 210 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 WDR61Q9GZS3 305 aaKnown RBP17.26■□□□□ 0.35
SSBP3-216ENST00000610401 PRDM14Q9GZV8 571 aa17.26■□□□□ 0.35
SSBP3-216ENST00000610401 TRAV38-1A0A0B4J264 116 aa17.25■□□□□ 0.35
SSBP3-216ENST00000610401 MEF2BQ02080 365 aaPredicted RBP17.25■□□□□ 0.35
SSBP3-216ENST00000610401 AESQ08117 197 aa17.25■□□□□ 0.35
SSBP3-216ENST00000610401 MAS1LP35410 378 aa17.25■□□□□ 0.35
SSBP3-216ENST00000610401 ABLIM2Q6H8Q1 611 aa17.25■□□□□ 0.35
SSBP3-216ENST00000610401 OR10G4Q8NGN3 311 aa17.25■□□□□ 0.35
SSBP3-216ENST00000610401 OR10G9Q8NGN4 311 aa17.25■□□□□ 0.35
SSBP3-216ENST00000610401 OR10G7Q8NGN6 311 aa17.25■□□□□ 0.35
SSBP3-216ENST00000610401 OR2J1Q9GZK6 312 aa17.25■□□□□ 0.35
SSBP3-216ENST00000610401 PATZ1Q9HBE1 687 aaKnown RBP17.25■□□□□ 0.35
SSBP3-216ENST00000610401 SYNGR4O95473 234 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 RPL30P62888 115 aaKnown RBP17.24■□□□□ 0.35
SSBP3-216ENST00000610401 SNIP1Q8TAD8 396 aaKnown RBP17.24■□□□□ 0.35
SSBP3-216ENST00000610401 PCED1AQ9H1Q7 454 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 ADGRG4Q8IZF6 3080 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 EDDM3BP56851 147 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 ZNF664Q8N3J9 261 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 WDYHV1Q96HA8 205 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 TMEM9BQ9NQ34 198 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 IFNA10P01566 189 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 RPL23P62829 140 aaKnown RBP17.24■□□□□ 0.35
SSBP3-216ENST00000610401 VKORC1L1Q8N0U8 176 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 DCTN5Q9BTE1 182 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 ZNF391Q9UJN7 358 aa17.24■□□□□ 0.35
SSBP3-216ENST00000610401 GZMBP10144 247 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 GNG3P63215 75 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 LRRC75BQ2VPJ9 315 aa17.23■□□□□ 0.35
SSBP3-216ENST00000610401 TMEM41BQ5BJD5 291 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms