RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 Q9UF83 564 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 ERG28Q9UKR5 140 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 PIKFYVEQ9Y2I7 2098 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 GREB1LQ9C091 1923 aaPredicted RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A1W2PPI3 338 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 MAP1LC3B2A6NCE7 125 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF860A6NHJ4 632 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 TAPBPO15533 448 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 RAMP1O60894 148 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 CRYAAP02489 173 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 CTGFP29279 349 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 STC1P52823 247 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 CLDN6P56747 220 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 HSD52Q0P140 79 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 PAFAH1B3Q15102 231 aaKnown RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 RNASE12Q5GAN4 147 aaKnown RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 C1QL3Q5VWW1 255 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 Q6ZN92 141 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 TGIF2LYQ8IUE0 185 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF440Q8IYI8 595 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 GPHA2Q96T91 129 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SLC25A21Q9BQT8 299 aaPredicted RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 TSSK6Q9BXA6 273 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 MAP1LC3BQ9GZQ8 125 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 LPAR5Q9H1C0 372 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 FBXL15Q9H469 300 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 MOB1AQ9H8S9 216 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 PELI2Q9HAT8 420 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SPANXA1Q9NS26 97 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 TMEM106BQ9NUM4 274 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 TRAPPC2LQ9UL33 140 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 KCNS2Q9ULS6 477 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SIGLEC7Q9Y286 467 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 WSB1Q9Y6I7 421 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 IGHV2-26A0A0B4J1V2 119 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A1W2PRE2 83 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 ARRDC5A6NEK1 342 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 TLCD2A6NGC4 264 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF727A8MUV8 499 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 MPPED1O15442 326 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 FOXH1O75593 365 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 GPANK1O95872 356 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 ATP1B1P05026 303 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 OR1D5P58170 312 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 TMEM267Q0VDI3 215 aaPredicted RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 PDGFRLQ15198 375 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 OR1C1Q15619 314 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 OR7A5Q15622 319 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 UPP1Q16831 310 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 CEACAM21Q3KPI0 293 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SLC25A30Q5SVS4 291 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SPATA31B1PQ5VZV4 182 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 Q6ZRG5 221 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 NR2C2APQ86WQ0 139 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SUMF2Q8NBJ7 301 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 GPR32P1Q8NGA4 272 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 RNF128Q8TEB7 428 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 PPP1R1CQ8WVI7 109 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SKA2Q8WVK7 121 aaPredicted RBP4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 RASL11BQ9BPW5 248 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 SCML2Q9UQR0 700 aa4.22□□□□□ -1.73
SPTBN1-206ENST00000602898 FNDC1Q4ZHG4 1894 aaPredicted RBP4.21□□□□□ -1.73
SPTBN1-206ENST00000602898 COL4A4P53420 1690 aaPredicted RBP4.21□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A0J9YY10 115 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 SPAARA0A1B0GVQ0 90 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 A0A1B0GX78 115 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 GAGE12HA6NDE8 117 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 OR4C46A6NHA9 309 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 B5MCH6 92 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 H3BQ15 152 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 RHODO00212 210 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 TAAR5O14804 337 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 TRAF3IP2O43734 574 aaPredicted RBP4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 RAMP2O60895 175 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 NGFP01138 241 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 IGLC2P0DOY2 106 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 IGLC3P0DOY3 106 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 SPANXN4Q5MJ08 99 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 GTF2H5Q6ZYL4 71 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 SAXO1Q8IYX7 474 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 OR2T33Q8NG76 320 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 OR8G5Q8NG78 346 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 OR5AR1Q8NGP9 310 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF418Q8TF45 676 aaPredicted RBP4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 SLC25A43Q8WUT9 341 aaPredicted RBP4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 PPCDCQ96CD2 204 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 GNRHR2Q96P88 292 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 DERL1Q9BUN8 251 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 GLIPR2Q9H4G4 154 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 TAF9BQ9HBM6 251 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 DNAJC27Q9NZQ0 273 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 HSPB8Q9UJY1 196 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 MYO10Q9HD67 2058 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 A0A0G2JMM0 328 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 A0A1W2PPB8 328 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 A6NIN4 97 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 KIR3DP1A8MWS1 328 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 TMEM178BH3BS89 294 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 TAX1BP3O14907 124 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms