RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 EPHA1P21709 976 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 EIF4EBP1Q13541 118 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 ZNF808Q8N4W9 903 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 LINC01560Q8TB33 94 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 TMED6Q8WW62 240 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 NGBQ9NPG2 151 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 SDHAF2Q9NX18 166 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 DYSFO75923 2080 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 MYO18BQ8IUG5 2567 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 DIDO1Q9BTC0 2240 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 TAAR5O14804 337 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 CD55P08174 381 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 P2RY1P47900 373 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 RPL30P62888 115 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 CR1LQ2VPA4 569 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 TRAT1Q6PIZ9 186 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 Q6ZRM9 215 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 SDSLQ96GA7 329 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 GAFA1Q96PS6 74 aa14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 BARX1Q9HBU1 254 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 LIN7CQ9NUP9 197 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-216ENST00000598201 I3L521 148 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 ZG16O60844 167 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 IGKV1-5P01602 117 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 GYPAP02724 150 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 GZMHP20718 246 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 CHRNB4P30926 498 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 HTD2P86397 168 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 ID3Q02535 119 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 ZNF561Q8N587 486 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 CCL13Q99616 98 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 PLEKHF2Q9H8W4 249 aa14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 UBR5O95071 2799 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-216ENST00000598201 ST8SIA5O15466 376 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 SSSCA1O60232 199 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 GPR137BO60478 399 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 PITX3O75364 302 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 FBXL19-AS1Q494R0 122 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 BTNL3Q6UXE8 466 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 FAM216BQ8N7L0 139 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 ABHD14BQ96IU4 210 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 DIRC2Q96SL1 478 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 AGMATQ9BSE5 352 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 WFDC1Q9HC57 220 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 PSG11Q9UQ72 335 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 RAI1Q7Z5J4 1906 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 TMEM50AO95807 157 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 TNFRSF1AP19438 455 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 OMGP23515 440 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 NHLH2Q02577 135 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 FAM122CQ6P4D5 195 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 FGFRL1Q8N441 504 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 ZBTB34Q8NCN2 500 aa14.14□□□□□ -0.15
SHKBP1-216ENST00000598201 FAM24AA6NFZ4 105 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 RAMP3O60896 148 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 PLAUP00749 431 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 CGB3P0DN86 165 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 CGB7P0DN87 165 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 IRF2P14316 349 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 BRWD1-AS2P59051 145 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 LINC00205P59089 165 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 OR2B11Q5JQS5 317 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 UTF1Q5T230 341 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 GPR157Q5UAW9 335 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 TEX36Q5VZQ5 186 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 ZNF788Q6ZQV5 615 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 RNASE6Q93091 150 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 C14orf79Q96F83 325 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 PFDN2Q9UHV9 154 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 NUP50Q9UKX7 468 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 USF3Q68DE3 2245 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 A0A1B0GU03 582 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 KIAA1324LA8MWY0 1029 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 FGF16O43320 207 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 FAM157CP0CG43 387 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 LOXL3P58215 753 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 MORN2Q502X0 79 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 RNASE11Q8TAA1 199 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 CA5BP1Q8WTZ4 195 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 LSM10Q969L4 123 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 RNF115Q9Y4L5 304 aa14.13□□□□□ -0.15
SHKBP1-216ENST00000598201 FLNCQ14315 2725 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 IGSF23A1L1A6 192 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 RNF212BA8MTL3 300 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 SIAH2O43255 324 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 IGHV3-7P01780 117 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 GAPDHP04406 335 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 MUC1P15941 1255 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 LPAR6P43657 344 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 SRSF1Q07955 248 aaKnown RBP eCLIP14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 C17orf58Q2M2W7 97 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 MST1LQ2TV78 715 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 TCF23Q7RTU1 214 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 OR2C3Q8N628 320 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 ITLN2Q8WWU7 325 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 ZNF665Q9H7R5 613 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 SAP30LQ9HAJ7 183 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 CALYQ9NYX4 217 aa14.12□□□□□ -0.15
SHKBP1-216ENST00000598201 OR6C3Q9NZP0 311 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms