RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 PTHLHP12272 177 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 ELK1P19419 428 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 HOXD3P31249 432 aaPredicted RBP12.44□□□□□ -0.42
SKA2-209ENST00000583976 PRRX1P54821 245 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 GNG2P59768 71 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 MADCAM1Q13477 382 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 GNMTQ14749 295 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 MOB1BQ7L9L4 216 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 ZNF554Q86TJ5 538 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 WFDC9Q8NEX5 89 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 OR9G1Q8NH87 305 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 ZNF596Q8TC21 504 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 GALMQ96C23 342 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 RBM38Q9H0Z9 239 aaKnown RBP12.44□□□□□ -0.42
SKA2-209ENST00000583976 OR2S2Q9NQN1 319 aa12.44□□□□□ -0.42
SKA2-209ENST00000583976 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.44□□□□□ -0.42
SKA2-209ENST00000583976 RSL24D1Q9UHA3 163 aaKnown RBP12.44□□□□□ -0.42
SKA2-209ENST00000583976 A0A0A6YYH2 397 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 TCRBV4S1A1TA0A5B7 111 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 A6NJ64 397 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 XRCC3O43542 346 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 IGLV1-47P01700 117 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 PPP1CCP36873 323 aaKnown RBP12.43□□□□□ -0.42
SKA2-209ENST00000583976 MNDAP41218 407 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 HLA-DRB3P79483 266 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 HLA-DRB5Q30154 266 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 TMEM69Q5SWH9 247 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 ETV3LQ6ZN32 361 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 OR52M1Q8NGK5 317 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 ST6GALNAC5Q9BVH7 336 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 MGAT4AQ9UM21 535 aa12.43□□□□□ -0.42
SKA2-209ENST00000583976 SMIM31A0A1B0GVY4 71 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 TRDCB7Z8K6 153 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 BUB1B-PAK6H3BSN5 160 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 SLC31A2O15432 143 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 RGS5O15539 181 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 SSX5O60225 188 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 APOA1P02647 267 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 GSTT2P0CG29 244 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 GSTT2BP0CG30 244 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 HTD2P86397 168 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 PNLIPRP3Q17RR3 467 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 CENPVQ7Z7K6 275 aaPredicted RBP12.42□□□□□ -0.42
SKA2-209ENST00000583976 OR10X1Q8NGY0 326 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 DCUN1D5Q9BTE7 237 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 AUNIPQ9H7T9 357 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 CCDC59Q9P031 241 aaKnown RBP12.42□□□□□ -0.42
SKA2-209ENST00000583976 DPM3Q9P2X0 92 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 SLC23A1Q9UHI7 598 aa12.42□□□□□ -0.42
SKA2-209ENST00000583976 MRPS7Q9Y2R9 242 aaKnown RBP12.42□□□□□ -0.42
SKA2-209ENST00000583976 TSSC4Q9Y5U2 329 aaPredicted RBP12.42□□□□□ -0.42
SKA2-209ENST00000583976 DPPA5A6NC42 116 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 MEIS3P1A6NDR6 274 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 CTDSP2O14595 271 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 FCER2P06734 321 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 ZNF134P52741 427 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 TAS2R20P59543 309 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 PITPNAQ00169 270 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 MORN2Q502X0 79 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 C9orf152Q5JTZ5 239 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 VAX1Q5SQQ9 334 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 TPTE2P1Q5T6R2 138 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 C18orf65Q6ZTR6 163 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 C16orf82Q7Z2V1 217 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 OR4X2Q8NGF9 303 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 CMTM3Q96MX0 182 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 C6orf62Q9GZU0 229 aaPredicted RBP12.41□□□□□ -0.42
SKA2-209ENST00000583976 OR1A1Q9P1Q5 309 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 JPT1Q9UK76 154 aa12.41□□□□□ -0.42
SKA2-209ENST00000583976 IGKV1D-8A0A087WSZ0 117 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 LEUTXA8MZ59 168 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 BET1O15155 118 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 FABP7O15540 132 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 HSPA12AO43301 675 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 OR2F2O95006 317 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 DTYMKP23919 212 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 CEACAM6P40199 344 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 TMEM30BQ3MIR4 351 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 IGSF11Q5DX21 431 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 CT45A1Q5HYN5 189 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 GVQW1Q8N7I0 195 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 LINC00482Q8N8I6 264 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 CT45A3Q8NHU0 189 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 CAPSLQ8WWF8 208 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 AKR1E2Q96JD6 320 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 RBM14Q96PK6 669 aaKnown RBP12.4□□□□□ -0.42
SKA2-209ENST00000583976 SLIRPQ9GZT3 109 aaKnown RBP12.4□□□□□ -0.42
SKA2-209ENST00000583976 MIXL1Q9H2W2 232 aa12.4□□□□□ -0.42
SKA2-209ENST00000583976 AMMECR1Q9Y4X0 333 aaPredicted RBP12.4□□□□□ -0.42
SKA2-209ENST00000583976 IGKV1-6A0A0C4DH72 117 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 YPEL1O60688 119 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 ZBTB25P24278 435 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 CEACAM3P40198 252 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 DIAPH2-AS1Q14236 149 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 KIR2DS1Q14954 304 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 STEAP3Q658P3 488 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 ZNF329Q86UD4 541 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 SNX29P2Q8IUI4 249 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 LAX1Q8IWV1 398 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 ZNF439Q8NDP4 499 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms