RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 GLP1RP43220 463 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 HTR5AP47898 357 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 P2RY4P51582 365 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 AKR1C2P52895 323 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 EMP2P54851 167 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 LCN6P62502 163 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 AKR1C1Q04828 323 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 SHHQ15465 462 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 OR7A5Q15622 319 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 LRRC37A5PQ49AS3 106 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 TMEM31Q5JXX7 168 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 THEM4Q5T1C6 240 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 C1orf185Q5T7R7 199 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 PRAMEF20Q5VT98 475 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 AADACL3Q5VUY0 350 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 C1orf140Q5VVS0 124 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 OR52W1Q6IF63 320 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 HIST2H3AQ71DI3 136 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC35D2Q76EJ3 337 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 GRINAQ7Z429 371 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 P4HA3Q7Z4N8 544 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 DCXRQ7Z4W1 244 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 MARCH3Q86UD3 253 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 JAGN1Q8N5M9 183 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 ACBD4Q8NC06 268 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 CHST4Q8NCG5 386 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 PLPP5Q8NEB5 264 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 CCDC54Q8NEL0 328 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF563Q8TA94 476 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 NANPQ8TBE9 248 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF721Q8TF20 911 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 RNF138Q8WVD3 245 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 TCTEX1D2Q8WW35 142 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 TMEM37Q8WXS4 190 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 TMEM234Q8WY98 164 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 ADAT3Q96EY9 351 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 YPEL4Q96NS1 127 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 CDCA3Q99618 268 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 SULT4A1Q9BR01 284 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 GINS3Q9BRX5 216 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 NDUFAF3Q9BU61 184 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 ADAT1Q9BUB4 502 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 TM2D1Q9BX74 207 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 NXF5Q9H1B4 397 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 MOB1AQ9H8S9 216 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 CALHM2Q9HA72 323 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 TAF9BQ9HBM6 251 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 STARD5Q9NSY2 213 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 A0A0C4DFX4 3053 aa3.11□□□□□ -1.91
SMCHD1-208ENST00000583344 HCFC1P51610 2035 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 TRPM6Q9BX84 2022 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SCN3AQ9NY46 2000 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 LOC105371242A0A075B767 164 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 A0A087WWC5 75 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SPTY2D1-AS1A0A0U1RR47 76 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 C7orf77A4D0Y5 90 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF729A6NN14 1252 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 LINC00587B1AMM8 73 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 NPIPA2E9PIF3 369 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 C11orf98E9PRG8 122 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 PPIAL4DF5H284 164 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 PRAMEF26H0Y7S4 382 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 H3BMH7 237 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 WRBO00258 174 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SOCS1O15524 211 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 PPIHO43447 177 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 ICOSLGO75144 302 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 DEDDO75618 318 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 ADAP1O75689 374 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 NDUFA7O95182 113 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 AHSA1O95433 338 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 IGLV3-19P01714 112 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 S100A6P06703 90 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 CTSDP07339 412 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SFTA3P0C7M3 94 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF17P17021 662 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 RAB5AP20339 215 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 HNF1AP20823 631 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 GLRA1P23415 457 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 FKBP2P26885 142 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 LAP3P28838 519 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 RPL12P30050 165 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 FCGR2CP31995 323 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 CD80P33681 288 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF93P35789 620 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 LPAR6P43657 344 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 PPT1P50897 306 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 DAP3P51398 398 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 CCR4P51679 360 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 CLDN6P56747 220 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 TMEM33P57088 247 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 TAS2R46P59540 309 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 ATXN7L3Q14CW9 347 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 EBPQ15125 230 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 RHEBQ15382 184 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 OR1C1Q15619 314 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 SSX2Q16385 188 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 GUK1Q16774 197 aa3.1□□□□□ -1.91
SMCHD1-208ENST00000583344 RPL7L1Q6DKI1 246 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms