RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 FAAP20Q6NZ36 180 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 FAHD2BQ6P2I3 314 aaPredicted RBP8.51□□□□□ -1.05
CDH3-210ENST00000569117 SLC25A48Q6ZT89 311 aaKnown RBP8.51□□□□□ -1.05
CDH3-210ENST00000569117 OR2AK2Q8NG84 335 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 OR11H6Q8NGC7 330 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 OR10V1Q8NGI7 309 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 OR13D1Q8NGV5 346 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 OR9G1Q8NH87 305 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 ZNF596Q8TC21 504 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 GIMAP1Q8WWP7 306 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 LEAP2Q969E1 77 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 FAHD2AQ96GK7 314 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 ABHD14AQ9BUJ0 271 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 CLEC7AQ9BXN2 247 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 PARP12Q9H0J9 701 aaKnown RBP8.51□□□□□ -1.05
CDH3-210ENST00000569117 C7orf69Q9H7B7 122 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 HEXA-AS1Q9H8Q6 139 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 HRASLSQ9HDD0 168 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 KCNS2Q9ULS6 477 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 PSG11Q9UQ72 335 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 U3KQE9 123 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 TLN2Q9Y4G6 2542 aa8.51□□□□□ -1.05
CDH3-210ENST00000569117 TRAV40A0A0B4J280 105 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 NAP1L6A6NFF2 107 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 DISC1C4P0D8 188 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 PLA2G10O15496 165 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 PPYP01298 95 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 IGLV1-47P01700 117 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 IFNA6P05013 189 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 CD99P14209 185 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 NFYAP23511 347 aaPredicted RBP8.5□□□□□ -1.05
CDH3-210ENST00000569117 COX7A1P24310 79 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 FCGR2CP31995 323 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 CEACAM6P40199 344 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 GNG10P50151 68 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 IFITM3Q01628 133 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 ASAH1Q13510 395 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 CT83Q5H943 113 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 DHRS11Q6UWP2 260 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 LHFPL1Q86WI0 220 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 TMEM17Q86X19 198 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 LINC00311Q8N616 119 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 BEND2Q8NDZ0 799 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 OR6F1Q8NGZ6 308 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 OR56B4Q8NH76 319 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 MOB3AQ96BX8 217 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 SLC6A7Q99884 636 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 PRRT1Q99946 306 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 ZNF2Q9BSG1 426 aaPredicted RBP8.5□□□□□ -1.05
CDH3-210ENST00000569117 FXYD6Q9H0Q3 95 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 IFI27L2Q9H2X8 130 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 TBC1D24Q9ULP9 559 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 OR2W1Q9Y3N9 320 aa8.5□□□□□ -1.05
CDH3-210ENST00000569117 CSPG4Q6UVK1 2322 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 HIVEP1P15822 2718 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 MAST4O15021 2626 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 CENPXA8MT69 81 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 J3QR06 171 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 SLC31A2O15432 143 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 LYRM1O43325 122 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 FSHBP01225 129 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 AADACP22760 399 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 BTCP35070 178 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 RAB7AP51149 207 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 UBE2E1P51965 193 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 ZNF137PP52743 207 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 HERV-K104P61576 105 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 TSPAN5P62079 268 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 PRB3Q04118 309 aaPredicted RBP8.49□□□□□ -1.05
CDH3-210ENST00000569117 DCTN2Q13561 401 aaKnown RBP8.49□□□□□ -1.05
CDH3-210ENST00000569117 HLA-DRB5Q30154 266 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 CT45A1Q5HYN5 189 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 C16orf87Q6PH81 154 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 ABHD12Q8N2K0 398 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 PNKDQ8N490 385 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 OR51S1Q8NGJ8 323 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 CT45A3Q8NHU0 189 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 LHX4Q969G2 390 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 AGMATQ9BSE5 352 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 C11orf54Q9H0W9 315 aaPredicted RBP8.49□□□□□ -1.05
CDH3-210ENST00000569117 MMP28Q9H239 520 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 MCUBQ9NWR8 336 aa8.49□□□□□ -1.05
CDH3-210ENST00000569117 AMMECR1Q9Y4X0 333 aaPredicted RBP8.49□□□□□ -1.05
CDH3-210ENST00000569117 IGKV1D-13A0A0B4J2D9 117 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 IGHV1-69DA0A0B4J2H0 117 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 CENPVL3A0A0U1RRI6 287 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 LINC00854A0A1B0GVQ3 168 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 IGHV1-69P01742 117 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 IGHV3-7P01780 117 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 IGKV1-13P0DP09 117 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 LUMP51884 338 aaPredicted RBP8.48□□□□□ -1.05
CDH3-210ENST00000569117 ZNF134P52741 427 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 DEFA1P59665 94 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 DEFA3P59666 94 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 MSMO1Q15800 293 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 SCGB2B2Q4G0G5 96 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 MIDNQ504T8 468 aa8.48□□□□□ -1.05
CDH3-210ENST00000569117 KLF17Q5JT82 389 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms