RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 FAM212BQ9NTI7 297 aaPredicted RBP12.15□□□□□ -0.46
COMMD4-221ENST00000567935 CISD1Q9NZ45 108 aaKnown RBP12.15□□□□□ -0.46
COMMD4-221ENST00000567935 MBD2Q9UBB5 411 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 MAB21L2Q9Y586 359 aa12.15□□□□□ -0.46
COMMD4-221ENST00000567935 TRAV39A0A0B4J263 110 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 C15orf65H3BRN8 121 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 TMEM178BH3BS89 294 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 ITGB1BP1O14713 200 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 FSTL3O95633 263 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 CYB5R3P00387 301 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-221ENST00000567935 EDDM3AQ14507 147 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 SP6Q3SY56 376 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 LRRC37A5PQ49AS3 106 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 TMEM268Q5VZI3 342 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 ZNF645Q8N7E2 425 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 ZNF680Q8NEM1 530 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 OR13A1Q8NGR1 328 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 RBPMSQ93062 196 aaKnown RBP12.14□□□□□ -0.47
COMMD4-221ENST00000567935 PRR13Q9NZ81 148 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 LPAR3Q9UBY5 353 aa12.14□□□□□ -0.47
COMMD4-221ENST00000567935 ANK2Q01484 3957 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 TANC2Q9HCD6 1990 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 PPIAL4EA0A075B759 164 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 TRGV10A0A0A0MS01 117 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 KANTRA0A1W2PQU2 76 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 PPIAL4DF5H284 164 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 F2RL2O00254 374 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 NDUFA2O43678 99 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 SERPINE2P07093 398 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 PPIAL4FP0DN26 164 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 SLC25A6P12236 298 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 VDAC1P21796 283 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 PPOXP50336 477 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 CATR1Q13166 79 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 SWI5Q1ZZU3 235 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 MST1LQ2TV78 715 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 DEFB113Q30KQ7 82 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 LYZL2Q7Z4W2 148 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 C5orf24Q7Z6I8 188 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 DCUN1D4Q92564 292 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 CORO2AQ92828 525 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 GAFA1Q96PS6 74 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 PLEKHF2Q9H8W4 249 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 OR2S2Q9NQN1 319 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 TMEM106BQ9NUM4 274 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 GSKIPQ9P0R6 139 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 UBQLN2Q9UHD9 624 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 KCNS2Q9ULS6 477 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 PPIAL4AQ9Y536 164 aa12.13□□□□□ -0.47
COMMD4-221ENST00000567935 DSCAMO60469 2012 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 RNF222A6NCQ9 220 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 MPTX1A8MV57 137 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 DEFB108AA8MXU0 73 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 BCL2L11O43521 198 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 YPEL1O60688 119 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 ATP6V1G1O75348 118 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 OR8U9P0C7N5 309 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 LOXP28300 417 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-221ENST00000567935 UBA52P62987 128 aaKnown RBP12.12□□□□□ -0.47
COMMD4-221ENST00000567935 MEF2CQ06413 473 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-221ENST00000567935 RAB32Q13637 225 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 THOC7Q6I9Y2 204 aaKnown RBP12.12□□□□□ -0.47
COMMD4-221ENST00000567935 SELENOHQ8IZQ5 122 aaKnown RBP12.12□□□□□ -0.47
COMMD4-221ENST00000567935 CIARTQ8N365 385 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-221ENST00000567935 MUC15Q8N387 334 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 DRAM1Q8N682 238 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 SLC35G3Q8N808 338 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 ZNRF1Q8ND25 227 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 OR8U1Q8NH10 309 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 AQP10Q96PS8 301 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 YPEL2Q96QA6 119 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 RNF126Q9BV68 326 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 LINC00574Q9H8X3 128 aa12.12□□□□□ -0.47
COMMD4-221ENST00000567935 MXRA5Q9NR99 2828 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 HRNRQ86YZ3 2850 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-221ENST00000567935 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 hADV38S2A0JD32 116 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 ZNF729A6NN14 1252 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-221ENST00000567935 ATG12O94817 140 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 CGB3P0DN86 165 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 CGB7P0DN87 165 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 SSTR5P35346 364 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 EDDM3BP56851 147 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 HOXA4Q00056 320 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-221ENST00000567935 ZNF66Q6ZN08 573 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 OR10A7Q8NGE5 316 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 OR52L2PQ8NGH6 319 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 OR52M1Q8NGK5 317 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 LHFPL5Q8TAF8 219 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 LSM10Q969L4 123 aaKnown RBP12.11□□□□□ -0.47
COMMD4-221ENST00000567935 PLEKHA2Q9HB19 425 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 TAS2R3Q9NYW6 316 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 CALYQ9NYX4 217 aa12.11□□□□□ -0.47
COMMD4-221ENST00000567935 CUBNO60494 3623 aa12.1□□□□□ -0.47
COMMD4-221ENST00000567935 IGHV1-69-2A0A0G2JMI3 117 aa12.1□□□□□ -0.47
COMMD4-221ENST00000567935 KBTBD11-OT1A0A1B0GTJ5 212 aa12.1□□□□□ -0.47
COMMD4-221ENST00000567935 E5RGE8 158 aa12.1□□□□□ -0.47
COMMD4-221ENST00000567935 H0YIZ8 118 aa12.1□□□□□ -0.47
COMMD4-221ENST00000567935 ST8SIA3O43173 380 aa12.1□□□□□ -0.47
COMMD4-221ENST00000567935 SIAH2O43255 324 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms