RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 FADS6Q8N9I5 356 aa11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 NUP37Q8NFH4 326 aa11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 ZFP30Q9Y2G7 519 aa11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 RNASE1P07998 156 aaKnown RBP11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 MC5RP33032 325 aa11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 SMUG1Q53HV7 270 aa11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 C1orf174Q8IYL3 243 aa11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 OR8G5Q8NG78 346 aa11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 SIRT7Q9NRC8 400 aa11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 PAM16Q9Y3D7 125 aa11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 NPIPB6E9PJ23 425 aa11.79□□□□□ -0.52
CX3CL1-204ENST00000565912 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 MPV17P39210 176 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 LY6EQ16553 131 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 PITX3O75364 302 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 ACAA1P09110 424 aaPredicted RBP11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 RCC1P18754 421 aaPredicted RBP11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 RGPD4Q7Z3J3 1758 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 PRR33A8MZF0 331 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 OR2H2O95918 312 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 HOXA6P31267 233 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 IL36RNQ9UBH0 155 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 LINC00869P0C866 280 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 RUNX1Q01196 453 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 PRSS8Q16651 343 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 FAM53AQ6NSI3 398 aaPredicted RBP11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 PET117Q6UWS5 81 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 TMEM91Q6ZNR0 172 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 SPRED2Q7Z698 418 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 GCSAMQ8N6F7 178 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 KNTC1P50748 2209 aa11.78□□□□□ -0.52
CX3CL1-204ENST00000565912 AHRRA9YTQ3 701 aa11.77□□□□□ -0.52
CX3CL1-204ENST00000565912 SSTR5P35346 364 aa11.77□□□□□ -0.52
CX3CL1-204ENST00000565912 CD300CQ08708 224 aa11.77□□□□□ -0.52
CX3CL1-204ENST00000565912 PIMREGQ9BSJ6 248 aa11.77□□□□□ -0.52
CX3CL1-204ENST00000565912 ZNF256Q9Y2P7 627 aaPredicted RBP11.77□□□□□ -0.52
CX3CL1-204ENST00000565912 TAF1LQ8IZX4 1826 aa11.77□□□□□ -0.52
CX3CL1-204ENST00000565912 SEC11BP0C7V7 166 aa11.77□□□□□ -0.52
CX3CL1-204ENST00000565912 HERPUD1Q15011 391 aa11.77□□□□□ -0.52
CX3CL1-204ENST00000565912 HSPB7Q9UBY9 170 aa11.77□□□□□ -0.52
CX3CL1-204ENST00000565912 hCG_38984A0A1B0GV85 526 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 CD81P60033 236 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 NANOS3P60323 173 aaKnown RBP11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 ZP4Q12836 540 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 C10orf111Q8N326 155 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 ST6GALNAC2Q9UJ37 374 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 CCL27Q9Y4X3 112 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 FBLL1A6NHQ2 334 aaKnown RBP11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 WNT9BO14905 357 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 CD74P04233 296 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 SIAH2O43255 324 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 PRSS23O95084 383 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 NAT2P11245 290 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 CD99P14209 185 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 ZNF25P17030 456 aaPredicted RBP11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 FGF12P61328 243 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 SGMS2Q8NHU3 365 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 ELOVL1Q9BW60 279 aa11.77□□□□□ -0.53
CX3CL1-204ENST00000565912 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 PTP4A3O75365 173 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 CYB5R3P00387 301 aaPredicted RBP11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 C9orf62Q8N4C0 152 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 STPG3Q8N7X2 389 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 A8MWL6 223 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 LEUTXA8MZ59 168 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 DIRC3C9JPN6 131 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 SCTP09683 121 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 MDKP21741 143 aaPredicted RBP11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 FCGR2BP31994 310 aaPredicted RBP11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 RPL8P62917 257 aaKnown RBP11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 LAMTOR1Q6IAA8 161 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 LRRC3BQ96PB8 259 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 MOB4Q9Y3A3 225 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 SCGB1A1P11684 91 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 STPG2Q8N412 459 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 RAX2Q96IS3 184 aa11.76□□□□□ -0.53
CX3CL1-204ENST00000565912 A0A0U1RQV5 110 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 TMEM229AB2RXF0 380 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 CKS2P33552 79 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 ZNF383Q8NA42 475 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 PLXNB2O15031 1838 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 A0A1W2PPC1 479 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 PGPA6NDG6 321 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 MOSPD3O75425 235 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 OR2A4O95047 310 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 GCGP01275 180 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 MMD2Q8IY49 270 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 SLC22A18ASQ8N1D0 253 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 OR2A7Q96R45 310 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 DLL1O00548 723 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 DXOO77932 396 aaKnown RBP11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 KBTBD11O94819 623 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 CTSSP25774 331 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 COMPP49747 757 aaPredicted RBP11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 ATP5J2P56134 94 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 TGIF1Q15583 401 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 TEX29Q8N6K0 151 aa11.75□□□□□ -0.53
CX3CL1-204ENST00000565912 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms