RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 BRWD1-AS2P59051 145 aa12.25□□□□□ -0.45
CRTC3-210ENST00000560927 ZNF816Q0VGE8 651 aaPredicted RBP12.25□□□□□ -0.45
CRTC3-210ENST00000560927 RNF212Q495C1 297 aa12.25□□□□□ -0.45
CRTC3-210ENST00000560927 ZNF506Q5JVG8 444 aa12.25□□□□□ -0.45
CRTC3-210ENST00000560927 SLC35E4Q6ICL7 350 aa12.25□□□□□ -0.45
CRTC3-210ENST00000560927 BTNL3Q6UXE8 466 aa12.25□□□□□ -0.45
CRTC3-210ENST00000560927 SSX7Q7RTT5 188 aa12.25□□□□□ -0.45
CRTC3-210ENST00000560927 SNIP1Q8TAD8 396 aaKnown RBP12.25□□□□□ -0.45
CRTC3-210ENST00000560927 OPN3Q9H1Y3 402 aaPredicted RBP12.25□□□□□ -0.45
CRTC3-210ENST00000560927 OOEPA6NGQ2 149 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 PRR33A8MZF0 331 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
CRTC3-210ENST00000560927 RAB5AP20339 215 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 AGAP20933 346 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 SSTR5P35346 364 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 PLA2G5P39877 138 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 LINC00205P59089 165 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 UBE2KP61086 200 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 EIF4EBP1Q13541 118 aaPredicted RBP12.24□□□□□ -0.45
CRTC3-210ENST00000560927 ZNF726P1Q15940 193 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 ACSF3Q4G176 576 aaPredicted RBP12.24□□□□□ -0.45
CRTC3-210ENST00000560927 DPPA3Q6W0C5 159 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 SCGB1C1Q8TD33 95 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 RAB39BQ96DA2 213 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 HIPK2Q9H2X6 1198 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 DKK4Q9UBT3 224 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 MMP24Q9Y5R2 645 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 CACNA1GO43497 2377 aa12.24□□□□□ -0.45
CRTC3-210ENST00000560927 IGHV3-43A0A0B4J1X8 118 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 IGHV1-18A0A0C4DH31 117 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 TNFSF13O75888 250 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 IGHV3-43DP0DP04 118 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 COL10A1Q03692 680 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 DEFB109BQ30KR1 87 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 LILRB2Q8N423 598 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 C1orf162Q8NEQ5 155 aaPredicted RBP12.23□□□□□ -0.45
CRTC3-210ENST00000560927 SARAFQ96BY9 339 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 RBMXL1Q96E39 390 aaKnown RBP12.23□□□□□ -0.45
CRTC3-210ENST00000560927 TAAR6Q96RI8 345 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 RBKSQ9H477 322 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 USF3Q68DE3 2245 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 INTS1Q8N201 2190 aaKnown RBP12.23□□□□□ -0.45
CRTC3-210ENST00000560927 IGHV2OR16-5A0A0B4J2B6 119 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 RNF212BA8MTL3 300 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 ZNF727A8MUV8 499 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 C17orf98A8MV24 154 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 EIF3GO75821 320 aaKnown RBP eCLIP12.23□□□□□ -0.45
CRTC3-210ENST00000560927 HSPB1P04792 205 aaKnown RBP12.23□□□□□ -0.45
CRTC3-210ENST00000560927 KITLGP21583 273 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 ADAM5Q6NVV9 412 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 OR13A1Q8NGR1 328 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 RFESDQ8TAC1 157 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 OR4C12Q96R67 309 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 DCTN5Q9BTE1 182 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 PLSCR4Q9NRQ2 329 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 GNG13Q9P2W3 67 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 SVILO95425 2214 aa12.23□□□□□ -0.45
CRTC3-210ENST00000560927 S1PR2O95136 353 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 HBE1P02100 147 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 FGF8P55075 233 aaPredicted RBP12.22□□□□□ -0.45
CRTC3-210ENST00000560927 TNFRSF9Q07011 255 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 HNF4GQ14541 408 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 LRRC75BQ2VPJ9 315 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 LCN15Q6UWW0 184 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 STARD4Q96DR4 205 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 C12orf57Q99622 126 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 TRAV1-1A0A0B4J248 108 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 OR5H1A6NKK0 313 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 DEFB108AA8MXU0 73 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 PPIHO43447 177 aaKnown RBP12.22□□□□□ -0.45
CRTC3-210ENST00000560927 OR2C1O95371 312 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 CLDN1O95832 211 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 IGLV1-44P01699 117 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 P0C879 139 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 OR2B8PP59922 312 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 HBG1P69891 147 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 HBG2P69892 147 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 OR8G2PQ6IF36 304 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 ZNF561Q8N587 486 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 PRR7Q8TB68 274 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 YPEL4Q96NS1 127 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 ZNF665Q9H7R5 613 aa12.22□□□□□ -0.45
CRTC3-210ENST00000560927 ZNF71Q9NQZ8 489 aaPredicted RBP12.22□□□□□ -0.45
CRTC3-210ENST00000560927 CNOT1A5YKK6 2376 aaKnown RBP12.22□□□□□ -0.45
CRTC3-210ENST00000560927 LOC102723971A0A1B0GUV8 181 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 CD55P08174 381 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 GCH1P30793 250 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 MSMPQ1L6U9 139 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 EIF2S3LQ2VIR3 472 aaKnown RBP12.21□□□□□ -0.45
CRTC3-210ENST00000560927 ZNF718Q3SXZ3 478 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 ALKBH2Q6NS38 261 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 SEM1Q6ZVN7 128 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 CD177Q8N6Q3 437 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 TCTEX1D2Q8WW35 142 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 NINJ1Q92982 152 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 WDR61Q9GZS3 305 aaKnown RBP12.21□□□□□ -0.45
CRTC3-210ENST00000560927 UNKLQ9H9P5 680 aaKnown RBP12.21□□□□□ -0.45
CRTC3-210ENST00000560927 HSPB7Q9UBY9 170 aa12.21□□□□□ -0.45
CRTC3-210ENST00000560927 UBE2L5PA0A1B0GUS4 154 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms