RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 HSPA9P38646 679 aaKnown RBP2.24□□□□□ -2.05
SPG11-218ENST00000559754 GZMMP51124 257 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 CTBP2P56545 445 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 GABARAPL2P60520 117 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 RPL19P84098 196 aaKnown RBP2.24□□□□□ -2.05
SPG11-218ENST00000559754 JOSD1Q15040 202 aaPredicted RBP2.24□□□□□ -2.05
SPG11-218ENST00000559754 LIN52Q52LA3 116 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 KLHL12Q53G59 568 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 PYCR3Q53H96 274 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 Q5W150 140 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 TCF23Q7RTU1 214 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 ATP5L2Q7Z4Y8 100 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 CALHM3Q86XJ0 350 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 ZNF101Q8IZC7 436 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 ZNF567Q8N184 647 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 DEFB125Q8N687 156 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 YIPF7Q8N8F6 280 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 OR51D1Q8NGF3 324 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 NEK7Q8TDX7 302 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 C2orf15Q8WU43 125 aaKnown RBP2.24□□□□□ -2.05
SPG11-218ENST00000559754 FAM172AQ8WUF8 416 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 DCUN1D1Q96GG9 259 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 GPR82Q96P67 336 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 OR2V2Q96R30 315 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 PEBP4Q96S96 227 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 MARVELD1Q9BSK0 173 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 TRIM4Q9C037 500 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 DCSTAMPQ9H295 470 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 C11orf49Q9H6J7 331 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 NMNAT1Q9HAN9 279 aaPredicted RBP2.24□□□□□ -2.05
SPG11-218ENST00000559754 ZNF331Q9NQX6 463 aaPredicted RBP2.24□□□□□ -2.05
SPG11-218ENST00000559754 DOK5Q9P104 306 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 ZNF492Q9P255 531 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 CARHSP1Q9Y2V2 147 aaKnown RBP2.24□□□□□ -2.05
SPG11-218ENST00000559754 GRIN2BQ13224 1484 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 PLCH2O75038 1416 aa2.24□□□□□ -2.05
SPG11-218ENST00000559754 ANKRD30AQ9BXX3 1397 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 DICER1Q9UPY3 1922 aaKnown RBP2.23□□□□□ -2.05
SPG11-218ENST00000559754 IGLV4-69A0A075B6H9 119 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 IGHV3-43A0A0B4J1X8 118 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 GOLGA6L4A6NEF3 574 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 EEF1E1-BLOC1S5C9J1V9 151 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 ZNF878C9JN71 531 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 EEF1E1O43324 174 aaKnown RBP2.23□□□□□ -2.05
SPG11-218ENST00000559754 STK16O75716 305 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 IGHG2P01859 326 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 RPSAP08865 295 aaKnown RBP2.23□□□□□ -2.05
SPG11-218ENST00000559754 PTHLHP12272 177 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 ORM2P19652 201 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 TGFBR2P37173 567 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 PSME3P61289 254 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 HERVK_113P63121 156 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 PRDX4Q13162 271 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 PMAIP1Q13794 54 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 ZCWPW2Q504Y3 356 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 C1orf194Q5T5A4 169 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 HES3Q5TGS1 186 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 FAM71E1Q6IPT2 247 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 EBLN2Q6P2I7 272 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 ALKAL1Q6UXT8 129 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 Q6ZR03 302 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 GLT6D1Q7Z4J2 308 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 ZNF676Q8N7Q3 588 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 CYB561D1Q8N8Q1 229 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.23□□□□□ -2.05
SPG11-218ENST00000559754 LY6G5BQ8NDX9 201 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 KCTD4Q8WVF5 259 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 BORCS7Q96B45 105 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 OR52B2Q96RD2 323 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 TRIB3Q96RU7 358 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 CMSS1Q9BQ75 279 aaKnown RBP2.23□□□□□ -2.05
SPG11-218ENST00000559754 MED18Q9BUE0 208 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 MED28Q9H204 178 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 FAM60AQ9NP50 221 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 MRPL40Q9NQ50 206 aaKnown RBP2.23□□□□□ -2.05
SPG11-218ENST00000559754 GID8Q9NWU2 228 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 RWDD2AQ9UIY3 292 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 PRELID3BQ9Y3B1 194 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 WASHC3Q9Y3C0 194 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 PIK3C2GO75747 1445 aa2.23□□□□□ -2.05
SPG11-218ENST00000559754 SCN1AP35498 2009 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 NUP205Q92621 2012 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 CHD5Q8TDI0 1954 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 IGHV3OR15-7A0A075B7D8 119 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 H0YJX3 145 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 BHLHE40O14503 412 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 MRASO14807 208 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 KLRC4O43908 158 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 DEDDO75618 318 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 OR7C1O76099 320 aaPredicted RBP2.22□□□□□ -2.05
SPG11-218ENST00000559754 MT-CO2P00403 227 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 IGLV3-27P01718 113 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 IGHV1-46P01743 117 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 TTRP02766 147 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 CD5P06127 495 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 ADRA2AP08913 450 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 OR5AC1P0C628 307 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 CISD3P0C7P0 127 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 FAM228BP0C875 321 aa2.22□□□□□ -2.05
SPG11-218ENST00000559754 CD28P10747 220 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms