RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 PHYHIPLQ96FC7 376 aa7.09□□□□□ -1.27
USP3-208ENST00000558285 ZNF48Q96MX3 618 aaPredicted RBP7.09□□□□□ -1.27
USP3-208ENST00000558285 OR2A7Q96R45 310 aa7.09□□□□□ -1.27
USP3-208ENST00000558285 CLEC7AQ9BXN2 247 aa7.09□□□□□ -1.27
USP3-208ENST00000558285 ZNRD1Q9P1U0 126 aa7.09□□□□□ -1.27
USP3-208ENST00000558285 TRBV5-5A0A0J9YX44 114 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 SNRPGP15A8MWD9 76 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 GABRPO00591 440 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 CA11O75493 328 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 IGHV1-8P0DP01 117 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 NPBWR2P48146 333 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 CD81P60033 236 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 ZP1P60852 638 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 LIPKQ5VXJ0 399 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 AWAT2Q6E213 333 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 ZNF529Q6P280 563 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 TRAT1Q6PIZ9 186 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 PNKDQ8N490 385 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 Q8N7P7 452 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 OR10A7Q8NGE5 316 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 OR51T1Q8NGJ9 327 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 OR4C13Q8NGP0 309 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 COQ8AQ8NI60 647 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 TMEM68Q96MH6 324 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 DUX5Q96PT3 197 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 NPFFR1Q9GZQ6 430 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 GPN1Q9HCN4 374 aaPredicted RBP7.08□□□□□ -1.28
USP3-208ENST00000558285 ESM1Q9NQ30 184 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 NIT2Q9NQR4 276 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 TNFRSF19Q9NS68 423 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 METTL1Q9UBP6 276 aaKnown RBP7.08□□□□□ -1.28
USP3-208ENST00000558285 CLEC2DQ9UHP7 191 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 ST3GAL6Q9Y274 331 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 CARHSP1Q9Y2V2 147 aaKnown RBP7.08□□□□□ -1.28
USP3-208ENST00000558285 CBY1Q9Y3M2 126 aa7.08□□□□□ -1.28
USP3-208ENST00000558285 A0A0G2JK05 382 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 ODAMA1E959 279 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A10PA6NDY2 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A18PA6NE21 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A16PA6NEW6 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A20PA6NIJ5 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A8PA6NJQ4 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A7PA6NKC0 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A22PA8MWA6 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A12PA8MX19 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A5PA8MXJ8 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A23PA8MXZ1 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 OOSP1A8MZH6 123 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 CTDSPLO15194 276 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 GSTZ1O43708 216 aaPredicted RBP7.07□□□□□ -1.28
USP3-208ENST00000558285 GPR137BO60478 399 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 TMEM127O75204 238 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 OR7C1O76099 320 aaPredicted RBP7.07□□□□□ -1.28
USP3-208ENST00000558285 IFNA10P01566 189 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 IL5P05113 134 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A15PP0C7V4 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A13PP0C7W8 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A14PP0C7W9 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 FAM90A24PP0C7X0 464 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 SNRPBP14678 240 aaKnown RBP7.07□□□□□ -1.28
USP3-208ENST00000558285 GZMHP20718 246 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 HTR1DP28221 377 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 DUSP1P28562 367 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 MNDAP41218 407 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 SPCS3P61009 180 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 SRSF2Q01130 221 aaKnown RBP7.07□□□□□ -1.28
USP3-208ENST00000558285 C10orf91Q5T1B1 145 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 GSG1LQ6UXU4 331 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 HEPN1Q6WQI6 88 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 ASCL4Q6XD76 172 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 OR11H6Q8NGC7 330 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 OR52N4Q8NGI2 321 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 CORO2AQ92828 525 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 TNFRSF14Q92956 283 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 CMTM3Q96MX0 182 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 SPACA5Q96QH8 159 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 OR14A2Q96R54 314 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 ZNF747Q9BV97 191 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 CHST6Q9GZX3 395 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 TMEM133Q9H2Q1 129 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 MRPS28Q9Y2Q9 187 aaKnown RBP7.07□□□□□ -1.28
USP3-208ENST00000558285 A0A1W2PRD5 423 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 A0A1W2PRF3 423 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 A0A1W2PRM7 423 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 TMEM30CPA0ZSE6 113 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 CLPSL1A2RUU4 121 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 C5orf52A6NGY3 159 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 DISC1C4P0D8 188 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 F2RL2O00254 374 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 SLC33A1O00400 549 aaPredicted RBP7.07□□□□□ -1.28
USP3-208ENST00000558285 TIMM23O14925 209 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 RPA2P15927 270 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 CCL3L1P16619 93 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 CXCL2P19875 107 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 RAB4AP20338 218 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 SERPINA2P20848 420 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 IL3RAP26951 378 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 CFPP27918 469 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 OR3A1P47881 315 aa7.07□□□□□ -1.28
USP3-208ENST00000558285 MECP2P51608 486 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms