RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 PCBD1P61457 104 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 IL24Q13007 206 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 OR1C1Q15619 314 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 ATP6V1FQ16864 119 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF787Q6DD87 383 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 COLCA1Q6ZS62 124 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 C16orf82Q7Z2V1 217 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF695Q8IW36 515 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 OSR2Q8N2R0 312 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 SPSB4Q96A44 273 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 MOB3AQ96BX8 217 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 HS3ST6Q96QI5 342 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 PCGF1Q9BSM1 259 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 TTTY12Q9BZ98 90 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 TMEM222Q9H0R3 208 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 PRSS50Q9UI38 385 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 ST3GAL6Q9Y274 331 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 KMT2EQ8IZD2 1858 aa10.43□□□□□ -0.74
SHMT2-207ENST00000553837 GALR1P47211 349 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 FUT6P51993 359 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 HERV-K104P61576 105 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 NUFIP2Q7Z417 695 aaKnown RBP10.42□□□□□ -0.74
SHMT2-207ENST00000553837 C17orf78Q8N4C9 275 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 OR51G1Q8NGK1 321 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 MBD3L1Q8WWY6 194 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 TMEM37Q8WXS4 190 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 MAGT1Q9H0U3 335 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 Q9N2K0 584 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 UBE2J1Q9Y385 318 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF816-ZNF321PA0A0X1KG74 233 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 A6NJY4 79 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 IFNA1P01562 189 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 CD55P08174 381 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 ADIRFQ15847 76 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 CXorf66Q5JRM2 361 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-207ENST00000553837 ABHD17BQ5VST6 288 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 WDR25Q64LD2 544 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-207ENST00000553837 OR8G2PQ6IF36 304 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF705AQ6ZN79 300 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-207ENST00000553837 CENPVQ7Z7K6 275 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-207ENST00000553837 MRGPRGQ86SM5 289 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 GBGT1Q8N5D6 347 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 TMEM251Q8N6I4 163 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 ORAOV1Q8WV07 137 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 TMEM56Q96MV1 263 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 AGMATQ9BSE5 352 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 PRDM14Q9GZV8 571 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 NAGKQ9UJ70 344 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 RNF150Q9ULK6 438 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 TMEM56-RWDD3S4R434 201 aa10.42□□□□□ -0.74
SHMT2-207ENST00000553837 SHANK1Q9Y566 2161 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 H7BYZ3 331 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 GZMHP20718 246 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 CCNOP22674 350 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 ERVS71-1P61550 626 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 RANP62826 216 aaKnown RBP10.41□□□□□ -0.74
SHMT2-207ENST00000553837 ID3Q02535 119 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF154Q13106 437 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 ACTL10Q5JWF8 245 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 ODF3L1Q8IXM7 274 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF665Q9H7R5 613 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 IL36GQ9NZH8 169 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF391Q9UJN7 358 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 POLR3KQ9Y2Y1 108 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-207ENST00000553837 DNAJC13O75165 2243 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 CEBPZOSA8MTT3 80 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 TMEM238C9JI98 176 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 C3orf80F5H4A9 247 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 SPINK2P20155 84 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 ELLP55199 621 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-207ENST00000553837 RBM11P57052 281 aaKnown RBP10.41□□□□□ -0.74
SHMT2-207ENST00000553837 BSXQ3C1V8 233 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 PLA2G2CQ5R387 149 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 LCN15Q6UWW0 184 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 CYP2G1PQ6ZSU1 146 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 C11orf42Q8N5U0 333 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF611Q8N823 705 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 NECAP1Q8NC96 275 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 OR56B2PQ8NGI1 322 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 SMIM7Q9BQ49 75 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 LINC00470Q9BZP3 86 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 OR2J1Q9GZK6 312 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 ZNF286AQ9HBT8 521 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 RYDENQ9NUL5 291 aaKnown RBP10.41□□□□□ -0.74
SHMT2-207ENST00000553837 FUT9Q9Y231 359 aa10.41□□□□□ -0.74
SHMT2-207ENST00000553837 KNTC1P50748 2209 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 CLEC18AA5D8T8 446 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 M0R296 226 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 CHST1O43916 411 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 HRASP01112 189 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 NGFP01138 241 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 PTTG1IPP53801 180 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 ACSF3Q4G176 576 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-207ENST00000553837 SELENOHQ8IZQ5 122 aaKnown RBP10.4□□□□□ -0.74
SHMT2-207ENST00000553837 CISD2Q8N5K1 135 aaKnown RBP10.4□□□□□ -0.74
SHMT2-207ENST00000553837 CLEC18CQ8NCF0 446 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 OR2D3Q8NGH3 330 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 SCGB1C1Q8TD33 95 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 C20orf144Q9BQM9 153 aa10.4□□□□□ -0.74
SHMT2-207ENST00000553837 MIEN1Q9BRT3 115 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms