RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SRP14P37108 136 aaKnown RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 RBPJQ06330 500 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 SRSF4Q08170 494 aaKnown RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 MYPOPQ86VE0 399 aaPredicted RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 C17orf78Q8N4C9 275 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ZBTB34Q8NCN2 500 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 OR5P3Q8WZ94 311 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 ZNF524Q96C55 264 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 LOXL4Q96JB6 756 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 C18orf12Q96KH6 178 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 RNF126Q9BV68 326 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 GGACTQ9BVM4 153 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 REG4Q9BYZ8 158 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 NGBQ9NPG2 151 aa4.98□□□□□ -1.61
VPS50-220ENST00000544910 FOXD3Q9UJU5 478 aaPredicted RBP4.98□□□□□ -1.61
VPS50-220ENST00000544910 TDRD6O60522 2096 aaKnown RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 IGHV3-43A0A0B4J1X8 118 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 OR7C2O60412 319 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 PGLYRP1O75594 196 aaPredicted RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 IGHV3-43DP0DP04 118 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 PPOXP50336 477 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 FGF8P55075 233 aaPredicted RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 PMP22Q01453 160 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 CDCP2Q5VXM1 449 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 ZNF818PQ6ZRF7 136 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 SLC35E3Q7Z769 313 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 ZNF837Q96EG3 531 aaPredicted RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 GINS3Q9BRX5 216 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 WDR61Q9GZS3 305 aaKnown RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 RALYQ9UKM9 306 aaKnown RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 CARHSP1Q9Y2V2 147 aaKnown RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 ZNF891A8MT65 544 aaPredicted RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 M0R2Z0 102 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 SPRY3O43610 288 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 CYB5R3P00387 301 aaPredicted RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 DANCRP0C864 163 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 IL3RAP26951 378 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 NPBWR2P48146 333 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 GNG4P50150 75 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 NHLH1Q02575 133 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 DEFB124Q8NES8 71 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 H1FXQ92522 213 aaKnown RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 MRGPRFQ96AM1 343 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 MSGN1A6NI15 193 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 PDE6DO43924 150 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 OR2H2O95918 312 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 PGA5P0DJD9 388 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 SCGB1C2P0DMR2 95 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 NDUFB7P17568 137 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 SCCPDHQ8NBX0 429 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 TP53RKQ96S44 253 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 SH3BGRL3Q9H299 93 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 KIAA1456Q9P272 454 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 UQCR10Q9UDW1 63 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 SLC45A2Q9UMX9 530 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 FUT9Q9Y231 359 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 ALPK3Q96L96 1907 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 TRGV10A0A0A0MS01 117 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 NTN3O00634 580 aaPredicted RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 ZFP36L1Q07352 338 aaKnown RBP4.97□□□□□ -1.61
VPS50-220ENST00000544910 C12orf54Q6X4T0 127 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 ZNF645Q8N7E2 425 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 OR10G8Q8NGN5 311 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 MAP1LC3CQ9BXW4 147 aa4.97□□□□□ -1.61
VPS50-220ENST00000544910 SERTM2A0A1B0GWG4 89 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 FCGR3BO75015 233 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 ZNF253O75346 499 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 CRYGSP22914 178 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 F2RP25116 425 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 CHRNA7P36544 502 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 ZNF83P51522 516 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 PMCHL1Q16048 86 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 SPINK9Q5DT21 86 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 OR4A47Q6IF82 309 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 DNM1P46Q6ZS02 220 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 OR1P1Q8NH06 330 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 OR2J1Q9GZK6 312 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 EGLN1Q9GZT9 426 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 RNF24Q9Y225 148 aa4.96□□□□□ -1.61
VPS50-220ENST00000544910 A0A1B0GV72 72 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 DIRC3C9JPN6 131 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 WISP1O95388 367 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 SP9P0CG40 484 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 G6PCP35575 357 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 RND3P61587 244 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 BPIFA4PQ86YQ2 179 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 OR10G4Q8NGN3 311 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 OR10G9Q8NGN4 311 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 OR10G7Q8NGN6 311 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 BLNKQ8WV28 456 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 SMIM8Q96KF7 97 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 RHOVQ96L33 236 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 NDFIP1Q9BT67 221 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 TINAGQ9UJW2 476 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 ETV2O00321 342 aaPredicted RBP4.96□□□□□ -1.62
VPS50-220ENST00000544910 ENSAO43768 121 aaKnown RBP4.96□□□□□ -1.62
VPS50-220ENST00000544910 ZNF883P0CG24 379 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 HOXA6P31267 233 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 ID4P47928 161 aa4.96□□□□□ -1.62
VPS50-220ENST00000544910 CDC34P49427 236 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms