RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 SERF2P84101 59 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 FAM106AQ4KMX7 169 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 GPX1P07203 203 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 ZNF345Q14585 488 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 C3AR1Q16581 482 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 A0A1W2PQM1 296 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 CLPPQ16740 277 aaPredicted RBP9.06□□□□□ -0.96
PCDH9-204ENST00000544246 DMKNQ6E0U4 476 aaPredicted RBP9.06□□□□□ -0.96
PCDH9-204ENST00000544246 Q6ZNB5 142 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 CYB561D1Q8N8Q1 229 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 WIPI2Q9Y4P8 454 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 PGPA6NDG6 321 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 TMEM177Q53S58 311 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 FAM74A4Q5TZK3 123 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 ABHD1Q96SE0 405 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 NEU1Q99519 415 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 VCX2Q9H322 139 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 SSC5DA1L4H1 1573 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 LINC00862A6NCI5 91 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 OR4C45A6NMZ5 311 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 OGG1O15527 345 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 MOSPD3O75425 235 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 MAGEA5P43359 124 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 TRIP6Q15654 476 aaKnown RBP9.06□□□□□ -0.96
PCDH9-204ENST00000544246 INO80CQ6PI98 192 aaPredicted RBP9.06□□□□□ -0.96
PCDH9-204ENST00000544246 RHOVQ96L33 236 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 NRIP2Q9BQI9 281 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 TXNDC17Q9BRA2 123 aa9.06□□□□□ -0.96
PCDH9-204ENST00000544246 IGHV5-51A0A0C4DH38 117 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 A1L4Q6 167 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 LINC00869P0C866 280 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 MESTQ5EB52 335 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 TP53I13Q8NBR0 393 aaPredicted RBP9.05□□□□□ -0.96
PCDH9-204ENST00000544246 PEF1Q9UBV8 284 aaKnown RBP9.05□□□□□ -0.96
PCDH9-204ENST00000544246 HILPDAQ9Y5L2 63 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 GDF9O60383 454 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 CLDN14O95500 239 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 PCP4P48539 62 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 SELENOTP62341 195 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 CLEC2AQ6UVW9 174 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 SH2D5Q6ZV89 423 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 LHFPL5Q8TAF8 219 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 SMOC1Q9H4F8 434 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 FRRS1LQ9P0K9 344 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 GHRHP01286 108 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 ATP5G2Q06055 141 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 C2orf88Q9BSF0 95 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 FSCN3Q9NQT6 498 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 TRAV30A0A087WSZ9 112 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 hCG_38984A0A1B0GV85 526 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 LIPT2A6NK58 231 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 LINC01565O15544 149 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 PRR35P0CG20 571 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 MC5RP33032 325 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 RPL31P62899 125 aaKnown RBP9.05□□□□□ -0.96
PCDH9-204ENST00000544246 NKG7Q16617 165 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 OR11H7Q8NGC8 314 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 OR5A1Q8NGJ0 315 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 ZDHHC8Q9ULC8 765 aa9.05□□□□□ -0.96
PCDH9-204ENST00000544246 PSMB11A5LHX3 300 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 TSPAN2O60636 221 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 TRGC2P03986 189 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 RCC1P18754 421 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-204ENST00000544246 SSTR5P35346 364 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 HIKESHIQ53FT3 197 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 UNQ5815/PRO19632Q6UWF5 114 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 PQLC2Q6ZP29 291 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 NPFFR1Q9GZQ6 430 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 ZNF430Q9H8G1 570 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-204ENST00000544246 DOCK1Q14185 1865 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 A0A1W2PQD3 144 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 GCSAMQ8N6F7 178 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 C16orf97H3BN30 126 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 H3BRM9 83 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 HYAL3O43820 417 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-204ENST00000544246 PLAUP00749 431 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 SRSF12Q8WXF0 261 aaKnown RBP9.04□□□□□ -0.96
PCDH9-204ENST00000544246 DMRTA2Q96SC8 542 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 TBL2Q9Y4P3 447 aaKnown RBP9.04□□□□□ -0.96
PCDH9-204ENST00000544246 DSPPQ9NZW4 1301 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 IGHV1OR21-1A0A087WYE8 117 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 SNRPCP09234 159 aaKnown RBP9.04□□□□□ -0.96
PCDH9-204ENST00000544246 RSPO2Q6UXX9 243 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-204ENST00000544246 GPBAR1Q8TDU6 330 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 APOBEC4Q8WW27 367 aaKnown RBP9.04□□□□□ -0.96
PCDH9-204ENST00000544246 COX6B1P14854 86 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 EPHA8P29322 1005 aaPredicted RBP9.04□□□□□ -0.96
PCDH9-204ENST00000544246 THSD4Q6ZMP0 1018 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 DDA1Q9BW61 102 aa9.04□□□□□ -0.96
PCDH9-204ENST00000544246 MYH15Q9Y2K3 1946 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 KCNE1BA0A087WTH5 132 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 MBNL2Q5VZF2 373 aaKnown RBP9.03□□□□□ -0.96
PCDH9-204ENST00000544246 ZNF645Q8N7E2 425 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 PHLDA1Q8WV24 401 aaPredicted RBP9.03□□□□□ -0.96
PCDH9-204ENST00000544246 LHX9Q9NQ69 397 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 TMEM160Q9NX00 188 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 MAST2Q6P0Q8 1798 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 TRBV7-9A0A0J9YWB2 115 aa9.03□□□□□ -0.96
PCDH9-204ENST00000544246 ZNF98A6NK75 572 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms