RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 AGMATQ9BSE5 352 aa11.33□□□□□ -0.6
HCFC2-202ENST00000544223 C19orf12Q9NSK7 152 aa11.33□□□□□ -0.6
HCFC2-202ENST00000544223 TMEM106BQ9NUM4 274 aa11.33□□□□□ -0.6
HCFC2-202ENST00000544223 RCL1Q9Y2P8 373 aaKnown RBP11.33□□□□□ -0.6
HCFC2-202ENST00000544223 TMEM56-RWDD3S4R434 201 aa11.33□□□□□ -0.6
HCFC2-202ENST00000544223 NPIPB11E5RHQ5 1161 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 SPINT2O43291 252 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 BCL2L11O43521 198 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 SSSCA1O60232 199 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 DEDDO75618 318 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 IFNA7P01567 189 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 HKR1P10072 659 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 LOXL3P58215 753 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 NHLH2Q02577 135 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 ZNF273Q14593 569 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 FBXL19-AS1Q494R0 122 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 AVPI1Q5T686 147 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 PRAMEF5Q5TYX0 476 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 LRTM2Q8N967 370 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 H1FXQ92522 213 aaKnown RBP11.32□□□□□ -0.6
HCFC2-202ENST00000544223 RBPMSQ93062 196 aaKnown RBP11.32□□□□□ -0.6
HCFC2-202ENST00000544223 SDHAF2Q9NX18 166 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 CALYQ9NYX4 217 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 RFNGQ9Y644 331 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 WNK2Q9Y3S1 2297 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 H0Y980 276 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 KRASP01116 189 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 IGKV1-5P01602 117 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 SOD3P08294 240 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 S100A1P23297 94 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 LOXP28300 417 aaPredicted RBP11.32□□□□□ -0.6
HCFC2-202ENST00000544223 RND3P61587 244 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 NDUFA5Q16718 116 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 ZNF561Q8N587 486 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 Q8TCH9 128 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 ASB13Q8WXK3 278 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 GPR146Q96CH1 333 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 NARFLQ9H6Q4 476 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
HCFC2-202ENST00000544223 DOPEY1Q5JWR5 2465 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 OR2F2O95006 317 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 TMEM50AO95807 157 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 G6PCP35575 357 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 OR2F1Q13607 317 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 ZNF672Q499Z4 452 aaPredicted RBP11.31□□□□□ -0.6
HCFC2-202ENST00000544223 MORN2Q502X0 79 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 SPINK9Q5DT21 86 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 NMSQ5H8A3 153 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 RPL7L1Q6DKI1 246 aaKnown RBP11.31□□□□□ -0.6
HCFC2-202ENST00000544223 FAM185AQ8N0U4 392 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 VKORC1L1Q8N0U8 176 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 OR4D5Q8NGN0 318 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 RNASE11Q8TAA1 199 aaKnown RBP11.31□□□□□ -0.6
HCFC2-202ENST00000544223 TCTEX1D2Q8WW35 142 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 SDSLQ96GA7 329 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 LURAP1Q96LR2 239 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 ZNF665Q9H7R5 613 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 CYTL1Q9NRR1 136 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 FBN2P35556 2912 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 PPIAL4EA0A075B759 164 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 A0A0D9SG52 128 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 LRRC30A6NM36 301 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 PPIAL4DF5H284 164 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 PPIAL4FP0DN26 164 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 RPL12P30050 165 aaKnown RBP11.31□□□□□ -0.6
HCFC2-202ENST00000544223 PLA2G5P39877 138 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 ZNF645Q8N7E2 425 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 DMBX1Q8NFW5 382 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 EGLN1Q9GZT9 426 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 SLC25A10Q9UBX3 287 aaPredicted RBP11.31□□□□□ -0.6
HCFC2-202ENST00000544223 NSG2Q9Y328 171 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 PPIAL4AQ9Y536 164 aa11.31□□□□□ -0.6
HCFC2-202ENST00000544223 IGHV1-69-2A0A0G2JMI3 117 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 FAM24AA6NFZ4 105 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 NDUFS7O75251 213 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 S1PR2O95136 353 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 RNF224P0DH78 156 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 AKR1C2P52895 323 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 SWI5Q1ZZU3 235 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 SLC51BQ86UW2 128 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 OR5D13Q8NGL4 314 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 ITLN2Q8WWU7 325 aaPredicted RBP11.3□□□□□ -0.6
HCFC2-202ENST00000544223 BBC3Q96PG8 261 aaPredicted RBP11.3□□□□□ -0.6
HCFC2-202ENST00000544223 CACNG5Q9UF02 275 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 TMED3Q9Y3Q3 217 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 CD55P08174 381 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 LPAR6P43657 344 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 ZNF345Q14585 488 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 TEX36Q5VZQ5 186 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 NCR3LG1Q68D85 454 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 ARPC5LQ9BPX5 153 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 LAMP3Q9UQV4 416 aa11.3□□□□□ -0.6
HCFC2-202ENST00000544223 SIGLEC5O15389 551 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 CAV2P51636 162 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 TMEM33P57088 247 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 RPS16P62249 146 aaKnown RBP11.29□□□□□ -0.6
HCFC2-202ENST00000544223 SSX9Q7RTT3 188 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 SPAG16Q8N0X2 631 aa11.29□□□□□ -0.6
HCFC2-202ENST00000544223 TMED6Q8WW62 240 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms