RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 PNRC1Q12796 327 aaPredicted RBP7.76□□□□□ -1.17
THBS3-211ENST00000541990 ZNF774Q6NX45 483 aa7.76□□□□□ -1.17
THBS3-211ENST00000541990 GJC3Q8NFK1 279 aa7.76□□□□□ -1.17
THBS3-211ENST00000541990 OR5T1Q8NG75 326 aa7.76□□□□□ -1.17
THBS3-211ENST00000541990 OR51G1Q8NGK1 321 aa7.76□□□□□ -1.17
THBS3-211ENST00000541990 ALKBH3Q96Q83 286 aaPredicted RBP7.76□□□□□ -1.17
THBS3-211ENST00000541990 SMIM7Q9BQ49 75 aa7.76□□□□□ -1.17
THBS3-211ENST00000541990 AURKAIP1Q9NWT8 199 aaPredicted RBP7.76□□□□□ -1.17
THBS3-211ENST00000541990 SLC22A20A6NK97 555 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 GALR1P47211 349 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 RPL29P47914 159 aaKnown RBP7.75□□□□□ -1.17
THBS3-211ENST00000541990 IDH3GP51553 393 aaPredicted RBP7.75□□□□□ -1.17
THBS3-211ENST00000541990 SOX8P57073 446 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 RPL23P62829 140 aaKnown RBP7.75□□□□□ -1.17
THBS3-211ENST00000541990 TESK1Q15569 626 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 TDRG1Q3Y452 100 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 SLC25A26Q70HW3 274 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 H1FOOQ8IZA3 346 aaPredicted RBP7.75□□□□□ -1.17
THBS3-211ENST00000541990 TMEM256Q8N2U0 113 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 OR2V1Q8NHB1 315 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 PLK3Q9H4B4 646 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 KIAA1549Q9HCM3 1950 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 ZGRF1Q86YA3 2104 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 CADP27708 2225 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 IGKV1-6A0A0C4DH72 117 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 AQP7P3A6NL99 342 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 PDCD6O75340 191 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 CNOT4O95628 575 aaKnown RBP7.75□□□□□ -1.17
THBS3-211ENST00000541990 TK1P04183 234 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 SP1P08047 785 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 RAB4AP20338 218 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 BMP5P22003 454 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 CARD18P57730 90 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 COA6Q5JTJ3 125 aaKnown RBP7.75□□□□□ -1.17
THBS3-211ENST00000541990 GGNQ86UU5 652 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 OR51H1Q8NH63 302 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 GPR146Q96CH1 333 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 FER1L6-AS2Q96M78 137 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 PYGO2Q9BRQ0 406 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 TMEM208Q9BTX3 173 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 CRIM1Q9NZV1 1036 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 CBY1Q9Y3M2 126 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 TRAV1-1A0A0B4J248 108 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 KIAA1324LA8MWY0 1029 aaPredicted RBP7.75□□□□□ -1.17
THBS3-211ENST00000541990 MSX1P28360 303 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 BAXQ07812 192 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 IL24Q13007 206 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 ZNF766Q5HY98 468 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 FAM185AQ8N0U4 392 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 GCNT2Q8N0V5 402 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 SNIP1Q8TAD8 396 aaKnown RBP7.75□□□□□ -1.17
THBS3-211ENST00000541990 EXTL1Q92935 676 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 SPIN2AQ99865 258 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 SPIN2BQ9BPZ2 258 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 PRSS50Q9UI38 385 aa7.75□□□□□ -1.17
THBS3-211ENST00000541990 MAP1LC3B2A6NCE7 125 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 MARCH11A6NNE9 402 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 PPP5D1E7EU14 171 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 SCGB1D1O95968 90 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 GCGP01275 180 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 MBP02144 154 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 LCATP04180 440 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 EGR1P18146 543 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 VDAC1P21796 283 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 SUMO3P55854 103 aaPredicted RBP7.74□□□□□ -1.17
THBS3-211ENST00000541990 FAM3BP58499 235 aaPredicted RBP7.74□□□□□ -1.17
THBS3-211ENST00000541990 MALLQ13021 153 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 TMEM170AQ8WVE7 144 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 SPSB1Q96BD6 273 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 MAP1LC3BQ9GZQ8 125 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 ZNF703Q9H7S9 590 aaPredicted RBP7.74□□□□□ -1.17
THBS3-211ENST00000541990 IGLV3-32A0A0A0MS00 114 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 NPIPA2E9PIF3 369 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 NPIPA3F8WFD2 350 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 H7BYZ3 331 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 IFNA5P01569 189 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 UCP1P25874 307 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 PDLIM4P50479 330 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 RBM11P57052 281 aaKnown RBP7.74□□□□□ -1.17
THBS3-211ENST00000541990 RPS16P62249 146 aaKnown RBP7.74□□□□□ -1.17
THBS3-211ENST00000541990 ZNF92Q03936 586 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 BSXQ3C1V8 233 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 ACTL10Q5JWF8 245 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 ALKBH2Q6NS38 261 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 Q6ZSR3 168 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 ZNF525Q8N782 197 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 FGFBP3Q8TAT2 258 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 PIGCQ92535 297 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 C12orf49Q9H741 205 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 SLC25A22Q9H936 323 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 VAX2Q9UIW0 290 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 GTF3C1Q12789 2109 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 CACNA1BQ00975 2339 aa7.74□□□□□ -1.17
THBS3-211ENST00000541990 M0R143 59 aa7.73□□□□□ -1.17
THBS3-211ENST00000541990 DHHO43323 396 aa7.73□□□□□ -1.17
THBS3-211ENST00000541990 TGOLN2O43493 480 aa7.73□□□□□ -1.17
THBS3-211ENST00000541990 ZNF737O75373 536 aa7.73□□□□□ -1.17
THBS3-211ENST00000541990 NRASP01111 189 aa7.73□□□□□ -1.17
THBS3-211ENST00000541990 PSG2P11465 335 aa7.73□□□□□ -1.17
THBS3-211ENST00000541990 IRF2P14316 349 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms