RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 KHDC3LQ587J8 217 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 MALSU1Q96EH3 234 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 C5orf30Q96GV9 206 aa11.13□□□□□ -0.63
PRKAB1-206ENST00000541640 A0A1B0GWJ7 208 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 H3BQ15 152 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 RAB5AP20339 215 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 UBE2KP61086 200 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 FOXF2Q12947 444 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 ZNF718Q3SXZ3 478 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 KRBOX4Q5JUW0 171 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 PRAMEF6Q5VXH4 476 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 MBNL2Q5VZF2 373 aaKnown RBP11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 C1orf174Q8IYL3 243 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 OR52L2PQ8NGH6 319 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 RSG1Q9BU20 258 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 FAM186AA6NE01 2351 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 A0A1W2PPE2 198 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 AHRRA9YTQ3 701 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 ARG1P05089 322 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 SERF2P84101 59 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 TNFRSF9Q07011 255 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 CATR1Q13166 79 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 TCTEX1D1Q8N7M0 179 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 OR10G4Q8NGN3 311 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 MBD3L1Q8WWY6 194 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 YPEL4Q96NS1 127 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 RPRMQ9NS64 109 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 HSPB7Q9UBY9 170 aa11.12□□□□□ -0.63
PRKAB1-206ENST00000541640 LOC102723971A0A1B0GUV8 181 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 RAMP3O60896 148 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 GCH1P30793 250 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 RPS23P62266 143 aaKnown RBP11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 RPL30P62888 115 aaKnown RBP11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 PAX5Q02548 391 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 NHLH1Q02575 133 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 SMIM21Q3B7S5 101 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 SPANXN5Q5MJ07 72 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 TMEM14EPQ6UXP3 125 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 LILRB2Q8N423 598 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 NINJ1Q92982 152 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 LURAP1Q96LR2 239 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 RBKSQ9H477 322 aa11.11□□□□□ -0.63
PRKAB1-206ENST00000541640 IGHV2OR16-5A0A0B4J2B6 119 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 IGHV1-18A0A0C4DH31 117 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 TNFSF13O75888 250 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 CGAP01215 116 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 GABRA2P47869 451 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 FABP6P51161 128 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 KIAA2026Q5HYC2 2103 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 FAM24BQ8N5W8 94 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 CYB561D1Q8N8Q1 229 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 ZNF610Q8N9Z0 462 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 MRGPRDQ8TDS7 321 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 WDR61Q9GZS3 305 aaKnown RBP11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 MSL2Q9HCI7 577 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 ZNF71Q9NQZ8 489 aaPredicted RBP11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 DKK4Q9UBT3 224 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 GVINP1Q7Z2Y8 2422 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 A0A087WWC5 75 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 C5orf52A6NGY3 159 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 OR2C1O95371 312 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 HOXA4Q00056 320 aaPredicted RBP11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 COL10A1Q03692 680 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 P2RY6Q15077 328 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 IGF2-ASQ6U949 168 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 ZNF429Q86V71 674 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 FAM169BQ8N8A8 192 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 RAB39BQ96DA2 213 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 STARD4Q96DR4 205 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 OR4C12Q96R67 309 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 VSIRQ9H7M9 311 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 UFSP2Q9NUQ7 469 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 FZR1Q9UM11 496 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 PROCRQ9UNN8 238 aa11.1□□□□□ -0.63
PRKAB1-206ENST00000541640 hCG_1809904A0A1W2PP81 198 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 A0A1W2PR64 198 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 A0A1W2PRV1 198 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 LRRC30A6NM36 301 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 TM4SF5O14894 197 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 CEACAM4O75871 244 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 FBP1P09467 338 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 G6PCP35575 357 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 GLIPR1P48060 266 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 BRWD1-AS2P59051 145 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 SNRPEP62304 92 aaKnown RBP11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 MZT1Q08AG7 82 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 SLC38A11Q08AI6 406 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 ZNF726P1Q15940 193 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 EIF2S3LQ2VIR3 472 aaKnown RBP11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 FAM53AQ6NSI3 398 aaPredicted RBP11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 MUCL1Q96DR8 90 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 CISD1Q9NZ45 108 aaKnown RBP11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 CACNA1GO43497 2377 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 KRASP01116 189 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 TFF1P04155 84 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 ZNF816Q0VGE8 651 aaPredicted RBP11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 GTF3C1Q12789 2109 aa11.09□□□□□ -0.63
PRKAB1-206ENST00000541640 TMEM41BQ5BJD5 291 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms