RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 HOXB13Q92826 284 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-211ENST00000539921 SPATA33Q96N06 139 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 NMNAT3Q96T66 252 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 TMEM70Q9BUB7 260 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 TPPP3Q9BW30 176 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 GGTLC1Q9BX51 225 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 SPANXDQ9BXN6 97 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 QTRT1Q9BXR0 403 aaKnown RBP5.24□□□□□ -1.57
SNHG1-211ENST00000539921 TMEM59Q9BXS4 323 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 ZNF160Q9HCG1 818 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 HSPB8Q9UJY1 196 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 ZNF257Q9Y2Q1 563 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 HCFC2Q9Y5Z7 792 aa5.24□□□□□ -1.57
SNHG1-211ENST00000539921 A0A0D9SEW6 157 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 TEX48A0A1B0GUV7 120 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 A0A1B0GV50 99 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 LOC107986453A0A1B0GWG9 222 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 LRRC30A6NM36 301 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 IFNL4K9M1U5 179 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 FCN1O00602 326 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 PLPP3O14495 311 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 PTGESO14684 152 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 SH2D1BO14796 132 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 XRCC2O43543 280 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 CELA2BP08218 269 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-211ENST00000539921 VDAC1P21796 283 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 ASCL1P50553 236 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 ZNF83P51522 516 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 DYNLT3P51808 116 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 MLF1P58340 268 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 ZNF726P1Q15940 193 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 SRSF7Q16629 238 aaKnown RBP eCLIP5.23□□□□□ -1.57
SNHG1-211ENST00000539921 ITPRIPL2Q3MIP1 535 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 ABCA11PQ4W5N1 156 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 LCN15Q6UWW0 184 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 UEVLDQ8IX04 471 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 TUSC5Q8IXB3 177 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 GCSAMQ8N6F7 178 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 OR4X2Q8NGF9 303 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 OR5D14Q8NGL3 314 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 SCAMP5Q8TAC9 235 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 PP6455Q8WZ26 134 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 OVCA2Q8WZ82 227 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 LHX4Q969G2 390 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 PTH2Q96A98 100 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 SLC35A4Q96G79 324 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 C1orf147Q96MC9 270 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-211ENST00000539921 SDF2Q99470 211 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 SLC25A33Q9BSK2 321 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 LMF2Q9BU23 707 aaKnown RBP5.23□□□□□ -1.57
SNHG1-211ENST00000539921 VN1R3Q9BXE9 311 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 C1QTNF4Q9BXJ3 329 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 CLEC7AQ9BXN2 247 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 TTTY10Q9BZA0 68 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 VN1R1Q9GZP7 353 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 TMEM126AQ9H061 195 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 TMEM222Q9H0R3 208 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 KCNK15Q9H427 330 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 IGFLR1Q9H665 355 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 ELOVL3Q9HB03 270 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 SCRT2Q9NQ03 307 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 SPANXB1Q9NS25 103 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-211ENST00000539921 SLC39A9Q9NUM3 307 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 NECAP2Q9NVZ3 263 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 ANXA10Q9UJ72 324 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 CES1P1Q9UKY3 287 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 RARRES3Q9UL19 164 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 TSSC4Q9Y5U2 329 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-211ENST00000539921 SPCS1Q9Y6A9 102 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 COL4A3Q01955 1670 aa5.23□□□□□ -1.57
SNHG1-211ENST00000539921 A0A0G2JLM5 398 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 CENPVL3A0A0U1RRI6 287 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 hCG_38984A0A1B0GV85 526 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 GRIFINA4D1Z8 144 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 FAM181BA6NEQ2 426 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 FAM24AA6NFZ4 105 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 C2orf70A6NJV1 201 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 H7C1C5 153 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 ATXN7O15265 892 aaPredicted RBP5.22□□□□□ -1.57
SNHG1-211ENST00000539921 DHHO43323 396 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 CLDN7O95471 211 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 CLDN1O95832 211 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 AVPP01185 164 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 LGALS2P05162 132 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 SERPINE2P07093 398 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 COX8AP10176 69 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 FUT1P19526 365 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 OTX2P32243 289 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 PTGDSP41222 190 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 SPINT3P49223 89 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 CX3CL1P78423 397 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 ZNF90Q03938 601 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 TAF10Q12962 218 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 RUNX3Q13761 415 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 ARFRP1Q13795 201 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 LY6DQ14210 128 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.22□□□□□ -1.572e-6■■■■■ 41.6
SNHG1-211ENST00000539921 TMEM177Q53S58 311 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 NMSQ5H8A3 153 aa5.22□□□□□ -1.57
SNHG1-211ENST00000539921 TIMM23BQ5SRD1 257 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms