RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TNFSF4P23510 183 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 AKR1C2P52895 323 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 UBA52P62987 128 aaKnown RBP11.72□□□□□ -0.53
ACTN1-205ENST00000538545 STUMQ69YW2 141 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 TCF23Q7RTU1 214 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 WFDC1Q9HC57 220 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 DYNLRB1Q9NP97 96 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 COQ3Q9NZJ6 369 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 TNCP24821 2201 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 MGST3O14880 152 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 ST8SIA3O43173 380 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 PET100P0DJ07 73 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 NFYBP25208 207 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 CHRNB4P30926 498 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 NUP62P37198 522 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-205ENST00000538545 NKX2-1P43699 371 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-205ENST00000538545 CAV2P51636 162 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 PRB3Q04118 309 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-205ENST00000538545 RPL39P5Q59GN2 51 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 LYPD2Q6UXB3 125 aa11.72□□□□□ -0.53
ACTN1-205ENST00000538545 CISD1Q9NZ45 108 aaKnown RBP11.72□□□□□ -0.53
ACTN1-205ENST00000538545 WNK2Q9Y3S1 2297 aa11.71□□□□□ -0.53
ACTN1-205ENST00000538545 SPG11Q96JI7 2443 aa11.71□□□□□ -0.53
ACTN1-205ENST00000538545 EPG5Q9HCE0 2579 aa11.71□□□□□ -0.53
ACTN1-205ENST00000538545 KRASP01116 189 aa11.71□□□□□ -0.53
ACTN1-205ENST00000538545 NDUFB7P17568 137 aa11.71□□□□□ -0.53
ACTN1-205ENST00000538545 VDAC1P21796 283 aa11.71□□□□□ -0.53
ACTN1-205ENST00000538545 P2RX3P56373 397 aa11.71□□□□□ -0.53
ACTN1-205ENST00000538545 MST1LQ2TV78 715 aa11.71□□□□□ -0.53
ACTN1-205ENST00000538545 CACNG5Q9UF02 275 aa11.71□□□□□ -0.53
ACTN1-205ENST00000538545 CST7O76096 145 aa11.71□□□□□ -0.54
ACTN1-205ENST00000538545 CLDN14O95500 239 aa11.71□□□□□ -0.54
ACTN1-205ENST00000538545 G6PCP35575 357 aa11.71□□□□□ -0.54
ACTN1-205ENST00000538545 TOR2AQ5JU69 321 aa11.71□□□□□ -0.54
ACTN1-205ENST00000538545 TMEM217Q8N7C4 229 aa11.71□□□□□ -0.54
ACTN1-205ENST00000538545 OR5D13Q8NGL4 314 aa11.71□□□□□ -0.54
ACTN1-205ENST00000538545 AGMATQ9BSE5 352 aa11.71□□□□□ -0.54
ACTN1-205ENST00000538545 SDHAF2Q9NX18 166 aa11.71□□□□□ -0.54
ACTN1-205ENST00000538545 PLA2G2EQ9NZK7 142 aa11.71□□□□□ -0.54
ACTN1-205ENST00000538545 MYO18BQ8IUG5 2567 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 SPINT2O43291 252 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 RRASP10301 218 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 IRF2P14316 349 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 DLX1P56177 255 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 CLINT1Q14677 625 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 BAP18Q8IXM2 172 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 ZNF645Q8N7E2 425 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 NSG2Q9Y328 171 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 CELSR1Q9NYQ6 3014 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 TUBAL3A6NHL2 446 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 WRBO00258 174 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 ZG16O60844 167 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 CD3EP07766 207 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 LPAR6P43657 344 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 GNG10P50151 68 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 C17orf58Q2M2W7 97 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 ESCO2Q56NI9 601 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 TCTEX1D2Q8WW35 142 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 LURAP1Q96LR2 239 aa11.7□□□□□ -0.54
ACTN1-205ENST00000538545 USP9XQ93008 2570 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-205ENST00000538545 IGSF23A1L1A6 192 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 CHST1O43916 411 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 SCO1O75880 301 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 S1PR2O95136 353 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 IAPPP10997 89 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 LOXL3P58215 753 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 TAGLNQ01995 201 aaKnown RBP11.69□□□□□ -0.54
ACTN1-205ENST00000538545 AKR1C1Q04828 323 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 AANATQ16613 207 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 SPINK9Q5DT21 86 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 THOC7Q6I9Y2 204 aaKnown RBP11.69□□□□□ -0.54
ACTN1-205ENST00000538545 ODF3L1Q8IXM7 274 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 FAM222BQ8WU58 562 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 REG4Q9BYZ8 158 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 CALYQ9NYX4 217 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 POMT1Q9Y6A1 747 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 S100GP29377 79 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 RPS16P62249 146 aaKnown RBP11.69□□□□□ -0.54
ACTN1-205ENST00000538545 MORN2Q502X0 79 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 ZNF788Q6ZQV5 615 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 PDZD9Q8IXQ8 264 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 VKORC1L1Q8N0U8 176 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 NDRG3Q9UGV2 375 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 ZFHX3Q15911 3703 aa11.69□□□□□ -0.54
ACTN1-205ENST00000538545 E5RGE8 158 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 CCL3L1P16619 93 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 TNFRSF1AP19438 455 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 ZNF273Q14593 569 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 NCR3LG1Q68D85 454 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 SPAG16Q8N0X2 631 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 NGBQ9NPG2 151 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 C19orf12Q9NSK7 152 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 PLXNB1O43157 2135 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 TPT1P13693 172 aaKnown RBP11.68□□□□□ -0.54
ACTN1-205ENST00000538545 SRPXP78539 464 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 PRAMEF5Q5TYX0 476 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 SSX9Q7RTT3 188 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 ZNF295-AS1Q8N0V1 137 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 ZNF561Q8N587 486 aa11.68□□□□□ -0.54
ACTN1-205ENST00000538545 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms