RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 ZNF737O75373 536 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 TMEM50AO95807 157 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 COX6A1P12074 109 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 ADMP35318 185 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 GJC3Q8NFK1 279 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 RBM24Q9BX46 236 aaKnown RBP16.35■□□□□ 0.21
SMPD1-210ENST00000534405 PARLQ9H300 379 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 VSIRQ9H7M9 311 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 NECAP2Q9NVZ3 263 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 TRIOBPQ9H2D6 2365 aa16.35■□□□□ 0.21
SMPD1-210ENST00000534405 DHRS3O75911 302 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 GYPAP02724 150 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 LIFP15018 202 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 FAM78BQ5VT40 261 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 PIGTQ969N2 578 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 SPIN2AQ99865 258 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 SPIN2BQ9BPZ2 258 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 WDR54Q9H977 334 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 PATZ1Q9HBE1 687 aaKnown RBP16.34■□□□□ 0.21
SMPD1-210ENST00000534405 SH3BGRL2Q9UJC5 107 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 PTRH2Q9Y3E5 179 aaKnown RBP16.34■□□□□ 0.21
SMPD1-210ENST00000534405 KLF7O75840 302 aaPredicted RBP16.34■□□□□ 0.21
SMPD1-210ENST00000534405 IFNA5P01569 189 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 CCL4P13236 92 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 FKBP2P26885 142 aaKnown RBP16.34■□□□□ 0.21
SMPD1-210ENST00000534405 APOBEC3AP31941 199 aaPredicted RBP16.34■□□□□ 0.21
SMPD1-210ENST00000534405 YPEL3P61236 119 aaPredicted RBP16.34■□□□□ 0.21
SMPD1-210ENST00000534405 FOXL2NBQ6ZUU3 175 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 ZIC4Q8N9L1 334 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 SIT1Q9Y3P8 196 aa16.34■□□□□ 0.21
SMPD1-210ENST00000534405 HS3ST1O14792 307 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 DHHO43323 396 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 VENTXO95231 258 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 FCGR2AP12318 317 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 OTX1P32242 354 aaPredicted RBP16.33■□□□□ 0.2
SMPD1-210ENST00000534405 SRPXP78539 464 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 CDCP2Q5VXM1 449 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 PIGLQ9Y2B2 252 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 GRIFINA4D1Z8 144 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 NPIPA2E9PIF3 369 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 NPIPA3F8WFD2 350 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 SERF1AO75920 110 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 HLA-HP01893 362 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 CD46P15529 392 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 GUCA1AP43080 201 aaPredicted RBP16.33■□□□□ 0.2
SMPD1-210ENST00000534405 NPBWR2P48146 333 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 HINT1P49773 126 aaPredicted RBP16.33■□□□□ 0.2
SMPD1-210ENST00000534405 ZNF133P52736 654 aaPredicted RBP16.33■□□□□ 0.2
SMPD1-210ENST00000534405 PPP1CBP62140 327 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 SNAI3Q3KNW1 292 aa16.33■□□□□ 0.2
SMPD1-210ENST00000534405 CXorf66Q5JRM2 361 aaPredicted RBP16.33■□□□□ 0.2
SMPD1-210ENST00000534405 HDHD3Q9BSH5 251 aaPredicted RBP16.33■□□□□ 0.2
SMPD1-210ENST00000534405 RYDENQ9NUL5 291 aaKnown RBP16.33■□□□□ 0.2
SMPD1-210ENST00000534405 A0A0J9YW62 118 aa16.32■□□□□ 0.2
SMPD1-210ENST00000534405 RNF212BA8MTL3 300 aa16.32■□□□□ 0.2
SMPD1-210ENST00000534405 TNFSF11O14788 317 aa16.32■□□□□ 0.2
SMPD1-210ENST00000534405 FXYD4P59646 89 aa16.32■□□□□ 0.2
SMPD1-210ENST00000534405 ZNF468Q5VIY5 522 aaPredicted RBP16.32■□□□□ 0.2
SMPD1-210ENST00000534405 MEX3BQ6ZN04 569 aaKnown RBP16.32■□□□□ 0.2
SMPD1-210ENST00000534405 MCEMP1Q8IX19 187 aa16.32■□□□□ 0.2
SMPD1-210ENST00000534405 PSMG3Q9BT73 122 aaPredicted RBP16.32■□□□□ 0.2
SMPD1-210ENST00000534405 SRXN1Q9BYN0 137 aa16.32■□□□□ 0.2
SMPD1-210ENST00000534405 FBXL7Q9UJT9 491 aa16.32■□□□□ 0.2
SMPD1-210ENST00000534405 CDC42EP3Q9UKI2 254 aa16.32■□□□□ 0.2
SMPD1-210ENST00000534405 PILRBQ9UKJ0 227 aa16.32■□□□□ 0.2
SMPD1-210ENST00000534405 DIRC3C9JPN6 131 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 M0R135 149 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 DSCR4P56555 118 aaPredicted RBP16.31■□□□□ 0.2
SMPD1-210ENST00000534405 PRSS12P56730 875 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 C6orf201Q7Z4U5 140 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 C20orf196Q8IYI0 205 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 CCDC71LQ8N9Z2 235 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 OR11L1Q8NGX0 322 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 STARD4Q96DR4 205 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 ZNF799Q96GE5 643 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 SH2D2AQ9NP31 389 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 SLC35D1Q9NTN3 355 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 MRPL27Q9P0M9 148 aaKnown RBP16.31■□□□□ 0.2
SMPD1-210ENST00000534405 ZNF850A8MQ14 1090 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 FAM166BA8MTA8 275 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 MDH2P40926 338 aaKnown RBP16.31■□□□□ 0.2
SMPD1-210ENST00000534405 LHX2P50458 406 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 ID3Q02535 119 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 FOXL1Q12952 345 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 NAT6Q93015 286 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 RSG1Q9BU20 258 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 ZNF286AQ9HBT8 521 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 PLEK2Q9NYT0 353 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 IL19Q9UHD0 177 aa16.31■□□□□ 0.2
SMPD1-210ENST00000534405 CYC1P08574 325 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 CD99P14209 185 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 TSPOP30536 169 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 NTF4P34130 210 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 IL11RAQ14626 422 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 PMS2CLQ68D20 193 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 SAXO1Q8IYX7 474 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 OR2M7Q8NG81 312 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 MRPL30Q8TCC3 161 aaKnown RBP16.3■□□□□ 0.2
SMPD1-210ENST00000534405 CLN8Q9UBY8 286 aa16.3■□□□□ 0.2
SMPD1-210ENST00000534405 IGHV1-69-2A0A0G2JMI3 117 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms