RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 OR5AP2Q8NGF4 316 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 SSMEM1Q8WWF3 244 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 EDARADDQ8WWZ3 215 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 ABHD14BQ96IU4 210 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 SSX3Q99909 188 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 AGMATQ9BSE5 352 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 NECAP2Q9NVZ3 263 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 RABL2AQ9UBK7 228 aaPredicted RBP11.29□□□□□ -0.6
USF1-209ENST00000529476 RNF150Q9ULK6 438 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 RABL2BQ9UNT1 228 aa11.29□□□□□ -0.6
USF1-209ENST00000529476 SAA2-SAA4A0A096LPE2 208 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 VGLL3A8MV65 326 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 OOSP1A8MZH6 123 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 H3BUX3 64 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 J3QRK9 145 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 RBBP9O75884 186 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 PMP2P02689 132 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 OR8U9P0C7N5 309 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 SAA2P0DJI9 122 aaPredicted RBP11.28□□□□□ -0.6
USF1-209ENST00000529476 OR5H8P0DN80 308 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 RFX2P48378 723 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 RAB7AP51149 207 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 ZNF137PP52743 207 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 MRPS10P82664 201 aaKnown RBP11.28□□□□□ -0.6
USF1-209ENST00000529476 ZNF816Q0VGE8 651 aaPredicted RBP11.28□□□□□ -0.6
USF1-209ENST00000529476 CDK10Q15131 360 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 OR5H2Q8NGV7 314 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 OR8U1Q8NH10 309 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 PIFOQ8TCI5 191 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 SMIM4Q8WVI0 70 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 RTN4IP1Q8WWV3 396 aaPredicted RBP11.28□□□□□ -0.6
USF1-209ENST00000529476 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 DPAGT1Q9H3H5 408 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 MTFP1Q9UDX5 166 aa11.28□□□□□ -0.6
USF1-209ENST00000529476 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 TIMM23O14925 209 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 LANCL1O43813 399 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 GAPDHP04406 335 aaKnown RBP11.27□□□□□ -0.61
USF1-209ENST00000529476 CD24P25063 80 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 FCGR2CP31995 323 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 HRH1P35367 487 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 ETV6P41212 452 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 TAS2R46P59540 309 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 ACTBP60709 375 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 UBA52P62987 128 aaKnown RBP11.27□□□□□ -0.61
USF1-209ENST00000529476 ACTG1P63261 375 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 ZNF79Q15937 498 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 AANATQ16613 207 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 PYDC2Q56P42 97 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 SPANXN2Q5MJ10 180 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 CCDC144NLQ6NUI1 221 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 ZNF833PQ6ZTB9 187 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 TGIF2LXQ8IUE1 241 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 ZNF251Q9BRH9 671 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 ABCB10Q9NRK6 738 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 EHFQ9NZC4 300 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 OR2W1Q9Y3N9 320 aa11.27□□□□□ -0.61
USF1-209ENST00000529476 IGKV1D-13A0A0B4J2D9 117 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 IGHV1-3A0A0C4DH29 117 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 BTBD17A6NE02 478 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 CLDN34H7C241 214 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 M0QYG6 137 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 RAB29O14966 203 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 GSTZ1O43708 216 aaPredicted RBP11.26□□□□□ -0.61
USF1-209ENST00000529476 TUSC2O75896 110 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 IGKV1-13P0DP09 117 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 AADACP22760 399 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 GPR12P47775 334 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 DYNLT3P51808 116 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 DYRK1AQ13627 763 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 LY6EQ16553 131 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 OVCH2Q7RTZ1 564 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 MOB3BQ86TA1 216 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 OR8H3Q8N146 312 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 TMEM86BQ8N661 226 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 DRAM1Q8N682 238 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 OR56B4Q8NH76 319 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 OR5R1Q8NH85 324 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 CFHR4Q92496 578 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 C19orf24Q9BVV8 132 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 CHIAQ9BZP6 476 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 OR2D2Q9H210 308 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 PTTG2Q9NZH5 202 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 PIPOXQ9P0Z9 390 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 ZNF221Q9UK13 617 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 RBMX2Q9Y388 322 aaKnown RBP11.26□□□□□ -0.61
USF1-209ENST00000529476 RBM7Q9Y580 266 aaKnown RBP11.26□□□□□ -0.61
USF1-209ENST00000529476 POMT1Q9Y6A1 747 aa11.26□□□□□ -0.61
USF1-209ENST00000529476 IGHV3-72A0A0B4J1Y9 119 aa11.25□□□□□ -0.61
USF1-209ENST00000529476 ZNF736B4DX44 427 aaPredicted RBP11.25□□□□□ -0.61
USF1-209ENST00000529476 PROP1O75360 226 aa11.25□□□□□ -0.61
USF1-209ENST00000529476 CD3DP04234 171 aa11.25□□□□□ -0.61
USF1-209ENST00000529476 PTBP1P26599 531 aaKnown RBP eCLIP11.25□□□□□ -0.61
USF1-209ENST00000529476 BRS3P32247 399 aa11.25□□□□□ -0.61
USF1-209ENST00000529476 LUMP51884 338 aaPredicted RBP11.25□□□□□ -0.61
USF1-209ENST00000529476 ARHGDIBP52566 201 aa11.25□□□□□ -0.61
USF1-209ENST00000529476 FBLN7Q53RD9 439 aa11.25□□□□□ -0.61
USF1-209ENST00000529476 TMEM229BQ8NBD8 167 aa11.25□□□□□ -0.61
USF1-209ENST00000529476 RBMXL1Q96E39 390 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms