RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 NPBWR2P48146 333 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 RFX2P48378 723 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 HOXA1P49639 335 aaPredicted RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 ASCL1P50553 236 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 FABP6P51161 128 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 FUT6P51993 359 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 DEFA1P59665 94 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 DEFA3P59666 94 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 RPS27AP62979 156 aaKnown RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 ASAH1Q13510 395 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 OXA1LQ15070 435 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 RSU1Q15404 277 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 OR8G1Q15617 311 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 C5orf64Q2M2E5 130 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 CEACAM21Q3KPI0 293 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 PIGYQ3MUY2 71 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 ZNF718Q3SXZ3 478 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 AKIRIN2Q53H80 203 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 ACTBL2Q562R1 376 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 PRSS57Q6UWY2 283 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 TMEM182Q6ZP80 229 aaPredicted RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 Q6ZTK2 550 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 SLC25A26Q70HW3 274 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 GDPD3Q7L5L3 318 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 NRARPQ7Z6K4 114 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 LRP11Q86VZ4 500 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 TMEM17Q86X19 198 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 ZNF611Q8N823 705 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 SCCPDHQ8NBX0 429 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 OR10AD1Q8NGE0 317 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 OR51T1Q8NGJ9 327 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 OR5M8Q8NGP6 311 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 OR8S1Q8NH09 359 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 OR51F2Q8NH61 342 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 NANPQ8TBE9 248 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 NEK7Q8TDX7 302 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 IGFBPL1Q8WX77 278 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 OR5P3Q8WZ94 311 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 ERGIC1Q969X5 290 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 PTX4Q96A99 478 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 SPSB1Q96BD6 273 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 ARHGAP5-AS1Q96IT6 56 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 PACRGQ96M98 296 aaPredicted RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 ZNF488Q96MN9 340 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 TECTBQ96PL2 329 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 S100A13Q99584 98 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 ADAT1Q9BUB4 502 aaKnown RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 C20orf24Q9BUV8 137 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 BCL2L14Q9BZR8 327 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 SELENOIQ9C0D9 397 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 NPFFR1Q9GZQ6 430 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 ALX4Q9H161 411 aaPredicted RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 MYOZ1Q9NP98 299 aaPredicted RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 ELOVL5Q9NYP7 299 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 RDH8Q9NYR8 311 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 IL36RNQ9UBH0 155 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 KLK11Q9UBX7 282 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 OR14J1Q9UGF5 321 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 PURGQ9UJV8 347 aaKnown RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 PITPNC1Q9UKF7 332 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 PPP1R3CQ9UQK1 317 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 PRELID3BQ9Y3B1 194 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 TNFRSF18Q9Y5U5 241 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 MPC1Q9Y5U8 109 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 KLF2Q9Y5W3 355 aaPredicted RBP3.49□□□□□ -1.85
CD44-226ENST00000527889 BIRC6Q9NR09 4857 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 CSMD2Q7Z408 3487 aa3.49□□□□□ -1.85
CD44-226ENST00000527889 ZANQ9Y493 2812 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 VPS13CQ709C8 3753 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 A0A1B0GV72 72 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 DPRXA6NFQ7 191 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 C5orf52A6NGY3 159 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 OR5B21A6NL26 309 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 F5H5P2 479 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 TRAPPC2LH3BP13 241 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 H7C417 338 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 M0QZ24 198 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 M0QZK8 103 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 NUPL2O15504 423 aaKnown RBP3.48□□□□□ -1.85
CD44-226ENST00000527889 NDUFB4O95168 129 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 CRYAAP02489 173 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 LINC00614P0C842 121 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 RD3LP0DJH9 198 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 KITLGP21583 273 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 GNLYP22749 145 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 S100PP25815 95 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 BLVRBP30043 206 aaPredicted RBP3.48□□□□□ -1.85
CD44-226ENST00000527889 CHRNB4P30926 498 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 BTCP35070 178 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 RCVRNP35243 200 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 GLRXP35754 106 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 CCR6P51684 374 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 AP2S1P53680 142 aaPredicted RBP3.48□□□□□ -1.85
CD44-226ENST00000527889 TMEM50BP56557 158 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 GNG3P63215 75 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 BSPH1Q075Z2 132 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 KLF9Q13886 244 aaPredicted RBP3.48□□□□□ -1.85
CD44-226ENST00000527889 PSG3Q16557 428 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 TAF9Q16594 264 aa3.48□□□□□ -1.85
CD44-226ENST00000527889 ZNF260Q3ZCT1 412 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms