RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ASCL4Q6XD76 172 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 AMIGO2Q86SJ2 522 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 BVESQ8NE79 360 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 OR8J1Q8NGP2 316 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 WDR89Q96FK6 387 aaPredicted RBP8.77□□□□□ -1.01
SDCBP-211ENST00000523441 ABHD14BQ96IU4 210 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 OVOL2Q9BRP0 275 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 IMPAD1Q9NX62 359 aa8.77□□□□□ -1.01
SDCBP-211ENST00000523441 KLK5Q9Y337 293 aaPredicted RBP8.77□□□□□ -1.01
SDCBP-211ENST00000523441 TMEM212A6NML5 194 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 ZNF785A8K8V0 405 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 CT45A6P0DMU7 189 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 CT45A5P0DMU8 189 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 CT45A7P0DMV0 189 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 ALDH3A2P51648 485 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 GTF2A1P52655 376 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-211ENST00000523441 LINC00205P59089 165 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 RPS16P62249 146 aaKnown RBP8.76□□□□□ -1.01
SDCBP-211ENST00000523441 PPP3R1P63098 170 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 C6orf141Q5SZD1 244 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 STEAP3Q658P3 488 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 TRAT1Q6PIZ9 186 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 LINC00596Q86U02 117 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 ACBD7Q8N6N7 88 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 SETD6Q8TBK2 473 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 JAM3Q9BX67 310 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 SELENOIQ9C0D9 397 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 PEMTQ9UBM1 199 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 ENOPH1Q9UHY7 261 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 WASHC3Q9Y3C0 194 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 VPS13DQ5THJ4 4388 aa8.76□□□□□ -1.01
SDCBP-211ENST00000523441 A0A0B4J203 849 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 H3BNX3 289 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 CPEP16870 476 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 CALB2P22676 271 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 BDKRB2P30411 391 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 GNGT1P63211 74 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 PJVKQ0ZLH3 352 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 TMED1Q13445 227 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 TMEM30BQ3MIR4 351 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 NHLRC3Q5JS37 347 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 ZNF562Q6V9R5 426 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 LYG2Q86SG7 212 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 ZDHHC13Q8IUH4 622 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 MUL1Q969V5 352 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 TMEM106AQ96A25 262 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 PHB2Q99623 299 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 ZNF184Q99676 751 aaPredicted RBP8.75□□□□□ -1.01
SDCBP-211ENST00000523441 IFI27L2Q9H2X8 130 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 PAK1IP1Q9NWT1 392 aaPredicted RBP8.75□□□□□ -1.01
SDCBP-211ENST00000523441 IL36GQ9NZH8 169 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 JPT1Q9UK76 154 aa8.75□□□□□ -1.01
SDCBP-211ENST00000523441 TCRBV3S1A0A5B6 114 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 H0YJW9 148 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 J3QRE1 110 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 SLC22A1O15245 554 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 CRTAPO75718 401 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-211ENST00000523441 PRH1P02810 166 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 CD2P06729 351 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 T-ENOLP0DO92 83 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 LGALS7P47929 136 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 GBX2P52951 348 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-211ENST00000523441 DMKNQ6E0U4 476 aaPredicted RBP8.74□□□□□ -1.01
SDCBP-211ENST00000523441 GLIPR1L1Q6UWM5 242 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 JAGN1Q8N5M9 183 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 OR13C5Q8NGS8 318 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 MRPL30Q8TCC3 161 aaKnown RBP8.74□□□□□ -1.01
SDCBP-211ENST00000523441 CACNG8Q8WXS5 425 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 FAM46BQ96A09 425 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 GALMQ96C23 342 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 LGALS12Q96DT0 336 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 MRPL48Q96GC5 212 aaKnown RBP8.74□□□□□ -1.01
SDCBP-211ENST00000523441 GGTLC1Q9BX51 225 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 SPACA1Q9HBV2 294 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 AMBNQ9NP70 447 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 TMEM138Q9NPI0 162 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 RCC2Q9P258 522 aaKnown RBP8.74□□□□□ -1.01
SDCBP-211ENST00000523441 STEAP1Q9UHE8 339 aa8.74□□□□□ -1.01
SDCBP-211ENST00000523441 A0A1W2PPK0 400 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 OR5H14A6NHG9 310 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 SAC3D1A6NKF1 404 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 YPEL1O60688 119 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 RBMXL2O75526 392 aaKnown RBP8.73□□□□□ -1.01
SDCBP-211ENST00000523441 OR2A4O95047 310 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 HLA-AP01891 365 aaKnown RBP8.73□□□□□ -1.01
SDCBP-211ENST00000523441 HOXB6P17509 224 aaKnown RBP8.73□□□□□ -1.01
SDCBP-211ENST00000523441 DEFB135Q30KP9 77 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 MOGAT2Q3SYC2 334 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 AWAT2Q6E213 333 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 ZNF529Q6P280 563 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 OR52B4Q8NGK2 314 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 SNAPC3Q92966 411 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 YPEL2Q96QA6 119 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 MED4Q9NPJ6 270 aa8.73□□□□□ -1.01
SDCBP-211ENST00000523441 LOC102724200A0A096LPH7 203 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-211ENST00000523441 PPP5D1E7EU14 171 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 BMPR1BO00238 502 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 RAB29O14966 203 aa8.72□□□□□ -1.01
SDCBP-211ENST00000523441 ZNF780AO75290 641 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-211ENST00000523441 SCAF4O95104 1147 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms