RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 IGKV1D-12P01611 117 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 Q0VFX4 171 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 WDFY1Q8IWB7 410 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR5D13Q8NGL4 314 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 TMEM147Q9BVK8 224 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 RHBDL1O75783 438 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 TNFRSF1AP19438 455 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 GZMHP20718 246 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 LGALS4P56470 323 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 ETV3LQ6ZN32 361 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 RBMXL3Q8N7X1 1067 aaKnown RBP9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR52L2PQ8NGH6 319 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR13D1Q8NGV5 346 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 GPR146Q96CH1 333 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 TREM2Q9NZC2 230 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 KIAA1549LQ6ZVL6 1849 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 AQP7O14520 342 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 ST8SIA5O15466 376 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 FOXG1P55316 489 aaPredicted RBP9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 SUPT4H1P63272 117 aaKnown RBP9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 LHFPL1Q86WI0 220 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR10G4Q8NGN3 311 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR10G9Q8NGN4 311 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR10G7Q8NGN6 311 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 KLF14Q8TD94 323 aaPredicted RBP9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 RNF166Q96A37 237 aaPredicted RBP9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 R3HDM4Q96D70 268 aa9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 LYRM2Q9NU23 88 aaPredicted RBP9.63□□□□□ -0.87
PCDHGB4-201ENST00000519479 A0A1W2PPQ1 181 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 E9PLN8 166 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 KRTCAP3Q53RY4 240 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 WBP1Q96G27 269 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 TIMD4Q96H15 378 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 OPN3Q9H1Y3 402 aaPredicted RBP9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR51M1Q9H341 326 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR6C3Q9NZP0 311 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 HBZP02008 142 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 COL10A1Q03692 680 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 VAMP3Q15836 100 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 ZBTB34Q8NCN2 500 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR1L1Q8NH94 360 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 BORCS7Q96B45 105 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 RSG1Q9BU20 258 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR51I2Q9H344 312 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 ACACAQ13085 2346 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 CLDN34H7C241 214 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 RAB5AP20339 215 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 HNF1AP20823 631 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 ATP6V1FQ16864 119 aa9.62□□□□□ -0.87
PCDHGB4-201ENST00000519479 PQLC2LA1A4F0 135 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 H3BQ15 152 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 DANCRP0C864 163 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 ZNF25P17030 456 aaPredicted RBP9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 NSUN5P2Q63ZY6 315 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 ZNF600Q6ZNG1 722 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 EIF4E3Q8N5X7 224 aaKnown RBP9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 FDCSPQ8NFU4 85 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 CORO2AQ92828 525 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 SCNM1Q9BWG6 230 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 IGHV3OR15-7A0A075B7D8 119 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 MMP9P14780 707 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 IL3RAP26951 378 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 TMEM108Q6UXF1 575 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 MARS2Q96GW9 593 aaKnown RBP9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 SLC35E1Q96K37 410 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 POM121L2Q96KW2 1035 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 KIAA1456Q9P272 454 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 CLN8Q9UBY8 286 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 M0R143 59 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 SOX15O60248 233 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 PRDX2P32119 198 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 OTX1P32242 354 aaPredicted RBP9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 RAB7AP51149 207 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 ERVS71-1P61550 626 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 IQCJQ1A5X6 159 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 ABHD14BQ96IU4 210 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 RPH3ALQ9UNE2 315 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR7C2O60412 319 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 HRASP01112 189 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 DLK1P80370 383 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 PRSS33Q8NF86 280 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 OR8G5Q8NG78 346 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 TUBD1Q9UJT1 453 aa9.61□□□□□ -0.87
PCDHGB4-201ENST00000519479 TMEM241Q24JQ0 296 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 FGFRL1Q8N441 504 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 HSD17B10Q99714 261 aaKnown RBP9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 ZNF71Q9NQZ8 489 aaPredicted RBP9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 WDR87Q6ZQQ6 2873 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 OPN1MWP04001 364 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 OPN1MW2P0DN77 364 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 OPN1MW3P0DN78 364 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 CDC34P49427 236 aaPredicted RBP9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 B3GALT5-AS1P59052 145 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 P2RY6Q15077 328 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 DNM1P46Q6ZS02 220 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 PLSCR2Q9NRY7 297 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 WIPI2Q9Y4P8 454 aa9.6□□□□□ -0.87
PCDHGB4-201ENST00000519479 F8VVB4 439 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms