RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ZP4Q12836 540 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 KHDC1LQ5JSQ8 128 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 SLC25A40Q8TBP6 338 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 NUDT16L1Q9BRJ7 211 aaKnown RBP11.37□□□□□ -0.59
TCOF1-213ENST00000514442 TPRP12270 2363 aaKnown RBP11.37□□□□□ -0.59
TCOF1-213ENST00000514442 IGKV1D-42A0A075B6H8 117 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 TGFBR3LH3BV60 316 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 PPIHO43447 177 aaKnown RBP11.37□□□□□ -0.59
TCOF1-213ENST00000514442 PCOLCEQ15113 449 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 PLAC9Q5JTB6 97 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 TBC1D26Q86UD7 250 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 WIPI2Q9Y4P8 454 aa11.37□□□□□ -0.59
TCOF1-213ENST00000514442 CXCL1P09341 107 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 TMEM252Q8N6L7 170 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 ASXL3Q9C0F0 2248 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 ZNF253O75346 499 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 MYPOPQ86VE0 399 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-213ENST00000514442 OR4X1Q8NH49 305 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 ZNF665Q9H7R5 613 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 ERHP84090 104 aaKnown RBP11.36□□□□□ -0.59
TCOF1-213ENST00000514442 MOB1BQ7L9L4 216 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 MOGAT3Q86VF5 341 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 ZCCHC14Q8WYQ9 949 aaKnown RBP11.36□□□□□ -0.59
TCOF1-213ENST00000514442 ALKBH7Q9BT30 221 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-213ENST00000514442 SLC7A10Q9NS82 523 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 TRBV6-7A0A0A0MS04 114 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 MS4A18H0YCH9 400 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 OR10J4P0C629 311 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 TNFSF10P50591 281 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 IGLV3-21P80748 117 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-213ENST00000514442 MS4A18Q3C1V0 323 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 PRR7Q8TB68 274 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 ZNF488Q96MN9 340 aa11.36□□□□□ -0.59
TCOF1-213ENST00000514442 ANKRD36A6QL64 1941 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 CYC1P08574 325 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 RNASEKQ6P5S7 137 aaKnown RBP11.35□□□□□ -0.59
TCOF1-213ENST00000514442 GSX1Q9H4S2 264 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-213ENST00000514442 DNAJC13O75165 2243 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 LMX1BO60663 402 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 COX5BP10606 129 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 VDAC1P21796 283 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 CDC34P49427 236 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-213ENST00000514442 PSG4Q00888 419 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 FDX2Q6P4F2 183 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 OR5B3Q8NH48 314 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 HDHD3Q9BSH5 251 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-213ENST00000514442 COX7A1P24310 79 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 SMIM12Q96EX1 92 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 GMPPAQ96IJ6 420 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-213ENST00000514442 TUBD1Q9UJT1 453 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 DNPH1O43598 174 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 IGKV3-11P04433 115 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 BRS3P32247 399 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 COX19Q49B96 90 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 RND1Q92730 232 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 GPR27Q9NS67 375 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 WASHC3Q9Y3C0 194 aa11.35□□□□□ -0.59
TCOF1-213ENST00000514442 OR7C2O60412 319 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 SPINK4O60575 86 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 KCNK17Q96T54 332 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 APC2O95996 2303 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 GVINP1Q7Z2Y8 2422 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 A8MWP6 167 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 EREGO14944 169 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 PDE6DO43924 150 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 AMBPP02760 352 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 TMEM50BP56557 158 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 ROM1Q03395 351 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 TMEM211Q6ICI0 200 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 TGIF2LYQ8IUE0 185 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 PAGE4O60829 102 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 AARDQ4LEZ3 155 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 TMEM208Q9BTX3 173 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 CACNG5Q9UF02 275 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 SIP14410 1827 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 IGLV1-36A0A0B4J1U3 117 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 A0A1W2PRD5 423 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 A0A1W2PRF3 423 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 A0A1W2PRM7 423 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 ISG15P05161 165 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 MPZP25189 248 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 MST1LQ2TV78 715 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 OR52M1Q8NGK5 317 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 SGMS2Q8NHU3 365 aa11.34□□□□□ -0.59
TCOF1-213ENST00000514442 M0R2Z0 102 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 TMPRSS2O15393 492 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 HAND1O96004 215 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 CD3EP07766 207 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 MEF2BQ02080 365 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-213ENST00000514442 FAM27BQ5VT28 67 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 ZNF664Q8N3J9 261 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 FGF11Q92914 225 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 A0A1W2PP11 408 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 SERF2P84101 59 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 FOXD3Q9UJU5 478 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-213ENST00000514442 DOCK6Q96HP0 2047 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 LOC101059948A0A1B0GTJ6 334 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 NCBP2LA6PVI3 153 aaKnown RBP11.33□□□□□ -0.6
TCOF1-213ENST00000514442 SNURFLB1AK76 121 aa11.33□□□□□ -0.6
TCOF1-213ENST00000514442 IGLV3-19P01714 112 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms