RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PARLQ9H300 379 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 FAM206AQ9NX38 181 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 ANKRD36A6QL64 1941 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 A6NDN8 102 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 APCSP02743 223 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 PSG2P11465 335 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 RAC3P60763 192 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 GAB4Q2WGN9 574 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 TXNDC17Q9BRA2 123 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 MRPL18Q9H0U6 180 aaKnown RBP9.75□□□□□ -0.85
TCOF1-211ENST00000513346 TMEM167BQ9NRX6 74 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 DOCK6Q96HP0 2047 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 TMEM30CPA0ZSE6 113 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 RPL36A-HNRNPH2H7BZ11 118 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 ZNF207O43670 478 aaKnown RBP9.74□□□□□ -0.85
TCOF1-211ENST00000513346 CNIH1O95406 144 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 F2RP25116 425 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 PRSS12P56730 875 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 LCN2P80188 198 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 DNLZQ5SXM8 178 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 DNASE2BQ8WZ79 361 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 TAF15Q92804 592 aaKnown RBP eCLIP9.74□□□□□ -0.85
TCOF1-211ENST00000513346 SDF2L1Q9HCN8 221 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 TAAR3PQ9P1P4 343 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 S100A7P31151 101 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 SRSF4Q08170 494 aaKnown RBP9.74□□□□□ -0.85
TCOF1-211ENST00000513346 CYP2G1PQ6ZSU1 146 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 OR1K1Q8NGR3 316 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 RPRMQ9NS64 109 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 SDK2Q58EX2 2172 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 HELTA6NFD8 242 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 SRSF10O75494 262 aaKnown RBP9.74□□□□□ -0.85
TCOF1-211ENST00000513346 FTH1P19P0C7X4 201 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 CT45A10P0DMU9 189 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 FOXL2P58012 376 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 IGFBP7Q16270 282 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 SMIM21Q3B7S5 101 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 ACSM6Q6P461 480 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 C12orf54Q6X4T0 127 aa9.74□□□□□ -0.85
TCOF1-211ENST00000513346 A0A0U1RQV5 110 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 SERTM2A0A1B0GWG4 89 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 IGSF23A1L1A6 192 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 H0Y980 276 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 CXorf1O96002 111 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 NGFP01138 241 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 TNFSF10P50591 281 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 ZNF83P51522 516 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 SOX8P57073 446 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 SPINK9Q5DT21 86 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 Q8IYB0 196 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 CLDND2Q8NHS1 167 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 ZNF519Q8TB69 540 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 MRPL37Q9BZE1 423 aaKnown RBP9.73□□□□□ -0.85
TCOF1-211ENST00000513346 FOXD3Q9UJU5 478 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-211ENST00000513346 PILRAQ9UKJ1 303 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 GRIFINA4D1Z8 144 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 GAGE10A6NGK3 116 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 B4E171 279 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 DLEU1O43261 78 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 COX7A2P2O60397 106 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 CXCL1P09341 107 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 DEFA4P12838 97 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 TSPAN7P41732 249 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 VWA1Q6PCB0 445 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 SELENOHQ8IZQ5 122 aaKnown RBP9.73□□□□□ -0.85
TCOF1-211ENST00000513346 CTHRC1Q96CG8 243 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 MAP1LC3CQ9BXW4 147 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 RALGAPA2Q2PPJ7 1873 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 SPRY3O43610 288 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 UCP3P55916 312 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 ALKBH6Q3KRA9 238 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 BPIFA4PQ86YQ2 179 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 GUCD1Q96NT3 240 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 OR4C12Q96R67 309 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 SEBOXQ9HB31 216 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-211ENST00000513346 PILRBQ9UKJ0 227 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 A0A0G2JMZ2 1700 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 LRRC37A2A6NM11 1700 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 CHD5Q8TDI0 1954 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 A0A087WV48 116 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 OR5AL1P0C617 328 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 IGFBP3P17936 291 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-211ENST00000513346 SLC23A3Q6PIS1 610 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 OR10X1Q8NGY0 326 aa9.73□□□□□ -0.85
TCOF1-211ENST00000513346 NYNRINQ9P2P1 1898 aaKnown RBP9.73□□□□□ -0.85
TCOF1-211ENST00000513346 RAB29O14966 203 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 VENTXO95231 258 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 CYC1P08574 325 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 TNFRSF1AP19438 455 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 ERHP84090 104 aaKnown RBP9.72□□□□□ -0.85
TCOF1-211ENST00000513346 ICAM4Q14773 271 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 KCNK17Q96T54 332 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 PSMG3Q9BT73 122 aaPredicted RBP9.72□□□□□ -0.85
TCOF1-211ENST00000513346 OR2D2Q9H210 308 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 BARX1Q9HBU1 254 aaPredicted RBP9.72□□□□□ -0.85
TCOF1-211ENST00000513346 LYZL6O75951 148 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 OR5D13Q8NGL4 314 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 PRSS3P2Q8NHM4 247 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 TMEM170AQ8WVE7 144 aa9.72□□□□□ -0.85
TCOF1-211ENST00000513346 TMEM230Q96A57 120 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms