RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ATXN7O15265 892 aaPredicted RBP12.18□□□□□ -0.46
DDX41-208ENST00000507955 RAMP3O60896 148 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 PITX3O75364 302 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 CGAP01215 116 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 IGKV1-5P01602 117 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 IGHV3-13P01766 116 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 IGHV3-7P01780 117 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 FBP1P09467 338 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 SSTR5P35346 364 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 GABRA2P47869 451 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 GLIPR1P48060 266 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 HNF4GQ14541 408 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 BTNL3Q6UXE8 466 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 C22orf34Q6ZV56 151 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 DRAM1Q8N682 238 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 PLEKHF2Q9H8W4 249 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 SEBOXQ9HB31 216 aaPredicted RBP12.18□□□□□ -0.46
DDX41-208ENST00000507955 PROCRQ9UNN8 238 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 HOXB1P14653 301 aaPredicted RBP12.17□□□□□ -0.46
DDX41-208ENST00000507955 NQO2P16083 231 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 RHEBQ15382 184 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 SP5Q6BEB4 398 aaPredicted RBP12.17□□□□□ -0.46
DDX41-208ENST00000507955 Q8IYB0 196 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 ZADH2Q8N4Q0 377 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 OR2Z1Q8NG97 314 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 C5orf30Q96GV9 206 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 COQ2Q96H96 371 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 SPIN2AQ99865 258 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 SPIN2BQ9BPZ2 258 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 PBDC1Q9BVG4 233 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 S100A12P80511 92 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 PRSS33Q8NF86 280 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 MBNL3Q9NUK0 354 aaKnown RBP12.17□□□□□ -0.46
DDX41-208ENST00000507955 ZZEF1O43149 2961 aa12.17□□□□□ -0.46
DDX41-208ENST00000507955 A0A1B0GW64 132 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 ZNF727A8MUV8 499 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 KIAA1324LA8MWY0 1029 aaPredicted RBP12.16□□□□□ -0.46
DDX41-208ENST00000507955 KLK10O43240 276 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 TXNL1O43396 289 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 COL10A1Q03692 680 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 SOHLH1Q5JUK2 328 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 ZNF474Q6S9Z5 364 aaPredicted RBP12.16□□□□□ -0.46
DDX41-208ENST00000507955 ACP7Q6ZNF0 438 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 BHLHA15Q7RTS1 189 aaPredicted RBP12.16□□□□□ -0.46
DDX41-208ENST00000507955 HES4Q9HCC6 221 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 METTL1Q9UBP6 276 aaKnown RBP12.16□□□□□ -0.46
DDX41-208ENST00000507955 IGHV3OR15-7A0A075B7D8 119 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 CLEC18AA5D8T8 446 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 RBFOX3A6NFN3 312 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 J3QW42 95 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 SMIM6P0DI80 62 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 GCH1P30793 250 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 RPL30P62888 115 aaKnown RBP12.16□□□□□ -0.46
DDX41-208ENST00000507955 EDDM3AQ14507 147 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 CLEC18CQ8NCF0 446 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 S100PBPQ96BU1 408 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 OR2D2Q9H210 308 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 FAM215AQ9Y5M1 114 aa12.16□□□□□ -0.46
DDX41-208ENST00000507955 ZNF891A8MT65 544 aaPredicted RBP12.15□□□□□ -0.46
DDX41-208ENST00000507955 M0R1B8 84 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 HBZP02008 142 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 EGR1P18146 543 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 MDH2P40926 338 aaKnown RBP12.15□□□□□ -0.46
DDX41-208ENST00000507955 ZNF816Q0VGE8 651 aaPredicted RBP12.15□□□□□ -0.46
DDX41-208ENST00000507955 ZNF266Q14584 549 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 FAM201AQ5SY85 155 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 ZGRF1Q86YA3 2104 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 LFNGQ8NES3 379 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 OR13A1Q8NGR1 328 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 TREM2Q9NZC2 230 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 WIPI2Q9Y4P8 454 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 OR5H1A6NKK0 313 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 AHRRA9YTQ3 701 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 CLN5O75503 358 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 CEACAM4O75871 244 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 S100GP29377 79 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 CEBPGP53567 150 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 MALSU1Q96EH3 234 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 ABHD14BQ96IU4 210 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 CXXC4Q9H2H0 198 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 GSN-AS1Q9NRJ2 163 aa12.15□□□□□ -0.46
DDX41-208ENST00000507955 OR2C1O95371 312 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 KRASP01116 189 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 IGLV1-44P01699 117 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 S100A8P05109 93 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 SRP19P09132 144 aaKnown RBP12.14□□□□□ -0.47
DDX41-208ENST00000507955 METTL15P1P0C7V9 234 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 IL2RGP31785 369 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 RPS16P62249 146 aaKnown RBP12.14□□□□□ -0.47
DDX41-208ENST00000507955 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 ZNF718Q3SXZ3 478 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 CD177Q8N6Q3 437 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 LRRC29Q8WV35 223 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 NIT2Q9NQR4 276 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 TMEM210A6NLX4 147 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 H3BQ15 152 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 ICAM4Q14773 271 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 NCMAPQ5T1S8 102 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 ZNF343Q6P1L6 599 aa12.14□□□□□ -0.47
DDX41-208ENST00000507955 HEPN1Q6WQI6 88 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms