RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 SPATA33Q96N06 139 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 NUDT22Q9BRQ3 303 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 TMEM204Q9BSN7 226 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 EBPLQ9BY08 206 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 CDIP1Q9H305 208 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 INSIG2Q9Y5U4 225 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 COL2A1P02458 1487 aaPredicted RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 MBD3L4A6NDZ8 208 aaPredicted RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 MBD3L3A6NE82 208 aaPredicted RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 MBD3L5A6NJ08 208 aaPredicted RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 CELA2AP08217 269 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 IRF1P10914 325 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 GATA2P23769 480 aaPredicted RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 POU3F1Q03052 451 aaPredicted RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 ENTPD8Q5MY95 495 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 DCAF12Q5T6F0 453 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 SP8Q8IXZ3 490 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 ATOH7Q8N100 152 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 TMEM123Q8N131 208 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 RBMXL3Q8N7X1 1067 aaKnown RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 SYT8Q8NBV8 401 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 OR1L4Q8NGR5 311 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 C18orf32Q8TCD1 76 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 HOXB13Q92826 284 aaPredicted RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 MAL2Q969L2 176 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 KLHDC7BQ96G42 594 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 OR4C12Q96R67 309 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 NKX2-4Q9H2Z4 354 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 SPANXCQ9NY87 97 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 SIGLEC8Q9NYZ4 499 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 A0A1B0GX51 115 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 A0A1W2PPV9 198 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 SOCS1O15524 211 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 CA3P07451 260 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 FAM106CPP0CH98 169 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 GRPRP30550 384 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 GPR183P32249 361 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 CXCL12P48061 93 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 PPP1CBP62140 327 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 LY6DQ14210 128 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 GGTLC2Q14390 218 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 ZNF146Q15072 292 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 FAM106AQ4KMX7 169 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 TMEM150AQ86TG1 271 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 TP53INP2Q8IXH6 220 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 OR5D14Q8NGL3 314 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 C8orf46Q8TAG6 207 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 C2orf15Q8WU43 125 aaKnown RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 KCNS1Q96KK3 526 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 PMCHL2Q9BQD1 86 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 LINC00597Q9H2U6 94 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 CISHQ9NSE2 258 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 TNS1Q9HBL0 1735 aaKnown RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 FNDC1Q4ZHG4 1894 aaPredicted RBP5.28□□□□□ -1.56
PDE4D-216ENST00000507116 SNED1Q8TER0 1413 aa5.28□□□□□ -1.56
PDE4D-216ENST00000507116 TRAV18A0A075B6X5 111 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 MEIS3P1A6NDR6 274 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 PHF1O43189 567 aaPredicted RBP5.27□□□□□ -1.57
PDE4D-216ENST00000507116 CD1AP06126 327 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 ZNF708P17019 499 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 CLDN6P56747 220 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 SLC35B1P78383 322 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 ZNF85Q03923 595 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 IL15RAQ13261 267 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 CLEC12BQ2HXU8 276 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 HLA-DRB5Q30154 266 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 GLYATL3Q5SZD4 288 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 DUX4L9Q6RFH8 374 aaPredicted RBP5.27□□□□□ -1.57
PDE4D-216ENST00000507116 GCSAMQ8N6F7 178 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 OR10G7Q8NGN6 311 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 OSR1Q8TAX0 266 aaPredicted RBP5.27□□□□□ -1.57
PDE4D-216ENST00000507116 AMELYQ99218 206 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 SCNM1Q9BWG6 230 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 SH3BGRL3Q9H299 93 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 C1orf123Q9NWV4 160 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 KCNE3Q9Y6H6 103 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 LY75O60449 1722 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 MED19A0JLT2 244 aaPredicted RBP5.27□□□□□ -1.57
PDE4D-216ENST00000507116 C9JAW5 83 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 FFAR1O14842 300 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 ENSAO43768 121 aaKnown RBP5.27□□□□□ -1.57
PDE4D-216ENST00000507116 DEDDO75618 318 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 STK17BO94768 372 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 CPSF4O95639 269 aaKnown RBP5.27□□□□□ -1.57
PDE4D-216ENST00000507116 SP1P08047 785 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 HIST1H1CP16403 213 aaKnown RBP5.27□□□□□ -1.57
PDE4D-216ENST00000507116 SRD5A1P18405 259 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 CRYBB3P26998 211 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 FUT6P51993 359 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 XGP55808 180 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 EDDM3AQ14507 147 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 FNDC7Q5VTL7 733 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 SP5Q6BEB4 398 aaPredicted RBP5.27□□□□□ -1.57
PDE4D-216ENST00000507116 OR2M3Q8NG83 312 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 OR13A1Q8NGR1 328 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 MRPL30Q8TCC3 161 aaKnown RBP5.27□□□□□ -1.57
PDE4D-216ENST00000507116 SMIM7Q9BQ49 75 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 ATG10Q9H0Y0 220 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 IL21Q9HBE4 155 aa5.27□□□□□ -1.57
PDE4D-216ENST00000507116 KCNS2Q9ULS6 477 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms