RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.24
SCLT1-208ENST00000506368 GCH1P30793 250 aa13.52□□□□□ -0.24
SCLT1-208ENST00000506368 OR10G9Q8NGN4 311 aa13.52□□□□□ -0.24
SCLT1-208ENST00000506368 OR10G7Q8NGN6 311 aa13.52□□□□□ -0.24
SCLT1-208ENST00000506368 OR2AE1Q8NHA4 323 aa13.52□□□□□ -0.24
SCLT1-208ENST00000506368 DNAJC4Q9NNZ3 241 aa13.52□□□□□ -0.24
SCLT1-208ENST00000506368 LIN7CQ9NUP9 197 aaKnown RBP13.52□□□□□ -0.24
SCLT1-208ENST00000506368 SLC45A2Q9UMX9 530 aa13.52□□□□□ -0.24
SCLT1-208ENST00000506368 MYO7BQ6PIF6 2116 aa13.52□□□□□ -0.24
SCLT1-208ENST00000506368 TRBV9A0A0B4J1U6 114 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 C20orf202A1L168 122 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 MPLP40238 635 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 WNT5AP41221 380 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 KLF3P57682 345 aaPredicted RBP13.52□□□□□ -0.25
SCLT1-208ENST00000506368 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
SCLT1-208ENST00000506368 Q0VG73 95 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 PHYHD1Q5SRE7 291 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 CST9LP1Q5W188 147 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 PRSS58Q8IYP2 241 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 OR2D3Q8NGH3 330 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 RNF2Q99496 336 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 KCNIP2Q9NS61 270 aa13.52□□□□□ -0.25
SCLT1-208ENST00000506368 GPR179Q6PRD1 2367 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 IGLV3-12A0A075B6K2 115 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 UBE2L5PA0A1B0GUS4 154 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 C17orf112F2Z3M2 114 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 MSMO1Q15800 293 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 Q6ZWC4 215 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 ANKRD37Q7Z713 158 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 KMT5CQ86Y97 462 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 C22orf15Q8WYQ4 148 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 RAB1CQ92928 201 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 MDFIC2A0A1B0GVS7 189 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 C11orf94C9JXX5 98 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 DEGS1O15121 323 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 IGKV1D-33P01593 117 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 IGKV1-33P01594 117 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 CHRNB4P30926 498 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 GNG10P50151 68 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 LEMD1Q68G75 181 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 C16orf47Q6ZP98 133 aaPredicted RBP13.51□□□□□ -0.25
SCLT1-208ENST00000506368 C11orf42Q8N5U0 333 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 SF3B5Q9BWJ5 86 aaKnown RBP13.51□□□□□ -0.25
SCLT1-208ENST00000506368 ZDHHC11Q9H8X9 412 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 UQCR10Q9UDW1 63 aa13.51□□□□□ -0.25
SCLT1-208ENST00000506368 TNRC6BQ9UPQ9 1833 aaKnown RBP13.51□□□□□ -0.25
SCLT1-208ENST00000506368 SHANK1Q9Y566 2161 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 TRBV11-1A0A0K0K1C0 115 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 DNPH1O43598 174 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 CBR3O75828 277 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 ZFAND5O76080 213 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 IAPPP10997 89 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 PSG2P11465 335 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 SELEP16581 610 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 CHRNA7P36544 502 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 PCBD1P61457 104 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 DAZAP2Q15038 168 aaPredicted RBP13.5□□□□□ -0.25
SCLT1-208ENST00000506368 CLEC12BQ2HXU8 276 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 ZNF324BQ6AW86 544 aaPredicted RBP13.5□□□□□ -0.25
SCLT1-208ENST00000506368 PCSK4Q6UW60 755 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 KCNE4Q8WWG9 221 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 SPSB4Q96A44 273 aa13.5□□□□□ -0.25
SCLT1-208ENST00000506368 NCOA6Q14686 2063 aaPredicted RBP13.5□□□□□ -0.25
SCLT1-208ENST00000506368 A0A1W2PPC4 97 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 CRISP2P16562 243 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 ADMP35318 185 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 PI4KAP42356 2102 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 CCL7P80098 99 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 COX19Q49B96 90 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 SPANXN5Q5MJ07 72 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 ACSM6Q6P461 480 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 PLXDC1Q8IUK5 500 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 ZNF709Q8N972 641 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 SFRP2Q96HF1 295 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 SLC25A22Q9H936 323 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 RNF212BA8MTL3 300 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 K7EP13 123 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 TCF21O43680 179 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 PAGE4O60829 102 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 REG1AP05451 166 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 EDN3P14138 238 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 CDKN1BP46527 198 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 RIPPLY2Q5TAB7 128 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 CDCP2Q5VXM1 449 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 PMS2CLQ68D20 193 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 FAM180AQ6UWF9 173 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 Q6ZRM9 215 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 OR10V1Q8NGI7 309 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 SGMS2Q8NHU3 365 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 PIGCQ92535 297 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 CIB3Q96Q77 187 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-208ENST00000506368 ZNF586Q9NXT0 402 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 PAM16Q9Y3D7 125 aa13.49□□□□□ -0.25
SCLT1-208ENST00000506368 IGKV1-6A0A0C4DH72 117 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 FAM166BA8MTA8 275 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 VWC2Q2TAL6 325 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 KLHDC1Q8N7A1 406 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 CPT1CQ8TCG5 803 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 HSPB9Q9BQS6 159 aa13.48□□□□□ -0.25
SCLT1-208ENST00000506368 IGHV3-20A0A0C4DH32 117 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms