RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 LRRC30A6NM36 301 aa13.71□□□□□ -0.22
ATG4B-225ENST00000494465 TMEM178BH3BS89 294 aa13.71□□□□□ -0.22
ATG4B-225ENST00000494465 IGKV1-5P01602 117 aa13.71□□□□□ -0.22
ATG4B-225ENST00000494465 NKX2-1P43699 371 aaPredicted RBP13.71□□□□□ -0.22
ATG4B-225ENST00000494465 MORN2Q502X0 79 aa13.71□□□□□ -0.22
ATG4B-225ENST00000494465 COMMD7Q86VX2 200 aa13.71□□□□□ -0.22
ATG4B-225ENST00000494465 FGFRL1Q8N441 504 aa13.71□□□□□ -0.22
ATG4B-225ENST00000494465 ABHD14BQ96IU4 210 aa13.71□□□□□ -0.22
ATG4B-225ENST00000494465 CALYQ9NYX4 217 aa13.71□□□□□ -0.22
ATG4B-225ENST00000494465 ST8SIA5O15466 376 aa13.7□□□□□ -0.22
ATG4B-225ENST00000494465 ZNF16P17020 682 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-225ENST00000494465 P2RY1P47900 373 aa13.7□□□□□ -0.22
ATG4B-225ENST00000494465 BRWD1-AS2P59051 145 aa13.7□□□□□ -0.22
ATG4B-225ENST00000494465 POLR2GP62487 172 aaKnown RBP eCLIP13.7□□□□□ -0.22
ATG4B-225ENST00000494465 Q6ZRM9 215 aa13.7□□□□□ -0.22
ATG4B-225ENST00000494465 BAP18Q8IXM2 172 aa13.7□□□□□ -0.22
ATG4B-225ENST00000494465 BSCL2Q96G97 398 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-225ENST00000494465 SLC25A32Q9H2D1 315 aa13.7□□□□□ -0.22
ATG4B-225ENST00000494465 KCNJ16Q9NPI9 418 aa13.7□□□□□ -0.22
ATG4B-225ENST00000494465 SDHAF2Q9NX18 166 aa13.7□□□□□ -0.22
ATG4B-225ENST00000494465 CISD1Q9NZ45 108 aaKnown RBP13.7□□□□□ -0.22
ATG4B-225ENST00000494465 RNF212BA8MTL3 300 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 B9A039 149 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 LGALS8O00214 317 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 TAAR5O14804 337 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 YPEL1O60688 119 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 SLC25A6P12236 298 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 TPT1P13693 172 aaKnown RBP13.69□□□□□ -0.22
ATG4B-225ENST00000494465 TMEM33P57088 247 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 IZUMO4Q1ZYL8 232 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 UTF1Q5T230 341 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 LSM10Q969L4 123 aaKnown RBP13.69□□□□□ -0.22
ATG4B-225ENST00000494465 YPEL2Q96QA6 119 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 MS4A5Q9H3V2 200 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 DYNLRB1Q9NP97 96 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 FBXL17Q9UF56 701 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 PSG11Q9UQ72 335 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 PIGBOS1A0A0B4J2F0 54 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 KIAA1324LA8MWY0 1029 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-225ENST00000494465 RAMP3O60896 148 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 PROP1O75360 226 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 FCN3O75636 299 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 OMGP23515 440 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 SWI5Q1ZZU3 235 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 RPL7L1Q6DKI1 246 aaKnown RBP13.69□□□□□ -0.22
ATG4B-225ENST00000494465 THOC7Q6I9Y2 204 aaKnown RBP13.69□□□□□ -0.22
ATG4B-225ENST00000494465 CLEC9AQ6UXN8 241 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 TMEM106BQ9NUM4 274 aa13.69□□□□□ -0.22
ATG4B-225ENST00000494465 A0A1B0GU03 582 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 BTNL3Q6UXE8 466 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 REG4Q9BYZ8 158 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 ZC4H2Q9NQZ6 224 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 MED9Q9NWA0 146 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 GNG12Q9UBI6 72 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 TRAV38-1A0A0B4J264 116 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 KBTBD11-OT1A0A1B0GTJ5 212 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 TMEM8BA6NDV4 472 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 TNFRSF13BO14836 293 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-225ENST00000494465 GPR137BO60478 399 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 ZNF134P52741 427 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 GPR157Q5UAW9 335 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 PDZD9Q8IXQ8 264 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 C1orf87Q8N0U7 546 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 EDARADDQ8WWZ3 215 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 CCL17Q92583 94 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 LRRC46Q96FV0 321 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 TMEM204Q9BSN7 226 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 MAGT1Q9H0U3 335 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 CLN8Q9UBY8 286 aa13.68□□□□□ -0.22
ATG4B-225ENST00000494465 TMPRSS2O15393 492 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 TMEM50AO95807 157 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 EPHA1P21709 976 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 LINC00205P59089 165 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 LINC00574Q9H8X3 128 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 ABCA4P78363 2273 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 PPIAL4EA0A075B759 164 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 LINC00473A8K010 186 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 C17orf98A8MV24 154 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 PPIAL4DF5H284 164 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 SSSCA1O60232 199 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 NXPH3O95157 252 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 PPIAL4FP0DN26 164 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 LPAR6P43657 344 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 Q3ZCU0 254 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 ZNF672Q499Z4 452 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-225ENST00000494465 FAM216AQ8WUB2 273 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 CORO2AQ92828 525 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 BARX1Q9HBU1 254 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-225ENST00000494465 PPIAL4AQ9Y536 164 aa13.67□□□□□ -0.22
ATG4B-225ENST00000494465 TRGV10A0A0A0MS01 117 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 CLDN14O95500 239 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 NHLH2Q02577 135 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 OR2B11Q5JQS5 317 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 ZNF66Q6ZN08 573 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 SMIM3Q9BZL3 60 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 IFI27L2Q9H2X8 130 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 CACNG5Q9UF02 275 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 NKX6-3A6NJ46 265 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 CLDN1O95832 211 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 GAPDHP04406 335 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms