RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TCF23Q7RTU1 214 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF554Q86TJ5 538 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 BCL6BQ8N143 479 aaPredicted RBP9.9□□□□□ -0.82
UPF3A-210ENST00000493727 OR1L1Q8NH94 360 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 RFESDQ8TAC1 157 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 C8orf46Q8TAG6 207 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 CORO2AQ92828 525 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 GALMQ96C23 342 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 GINS4Q9BRT9 223 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 NECAP2Q9NVZ3 263 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 MCUBQ9NWR8 336 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 EHFQ9NZC4 300 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF107Q9UII5 783 aaPredicted RBP9.9□□□□□ -0.82
UPF3A-210ENST00000493727 IGKV1D-8A0A087WSZ0 117 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 TRAV40A0A0B4J280 105 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 ANKRD20A5PA0PJZ0 165 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 CENPXA8MT69 81 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 M0QYG6 137 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 SDCBPO00560 298 aaPredicted RBP9.89□□□□□ -0.83
UPF3A-210ENST00000493727 RAB3DO95716 219 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 CD3DP04234 171 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 CTXN2P0C2S0 81 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 NAT1P18440 290 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 PI3P19957 117 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 TBPP20226 339 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 OMGP23515 440 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 MEF2DQ14814 521 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 CDK10Q15131 360 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 PRAMEF5Q5TYX0 476 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 GPR157Q5UAW9 335 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 STEAP1BQ6NZ63 245 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 OR5AP2Q8NGF4 316 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 DACT3Q96B18 629 aaPredicted RBP9.89□□□□□ -0.83
UPF3A-210ENST00000493727 ZNF48Q96MX3 618 aaPredicted RBP9.89□□□□□ -0.83
UPF3A-210ENST00000493727 DUX5Q96PT3 197 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 IDI2-AS1Q9NZ38 188 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 GNG12Q9UBI6 72 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 SLC23A1Q9UHI7 598 aa9.89□□□□□ -0.83
UPF3A-210ENST00000493727 A0A1B0GUS0 222 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 DISC1C4P0D8 188 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 C15orf65H3BRN8 121 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 AMY2AP04746 511 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 IGHV4-38-2P0DP08 117 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 NFYBP25208 207 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 DEFA1P59665 94 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 DEFA3P59666 94 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 TSPAN5P62079 268 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 ARF6P62330 175 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 DCTN2Q13561 401 aaKnown RBP9.88□□□□□ -0.83
UPF3A-210ENST00000493727 KLF9Q13886 244 aaPredicted RBP9.88□□□□□ -0.83
UPF3A-210ENST00000493727 SLC9A3R2Q15599 337 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 C17orf58Q2M2W7 97 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 IGSF11Q5DX21 431 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 METTL11BQ5VVY1 283 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 STEAP3Q658P3 488 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 C5orf24Q7Z6I8 188 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 TMEM17Q86X19 198 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 KIR3DL3Q8N743 410 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 LY6G5BQ8NDX9 201 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 OR10V1Q8NGI7 309 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 OR10J5Q8NHC4 309 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 CABLES2Q9BTV7 478 aa9.88□□□□□ -0.83
UPF3A-210ENST00000493727 UNKLQ9H9P5 680 aaKnown RBP9.88□□□□□ -0.83
UPF3A-210ENST00000493727 IGHV3-43A0A0B4J1X8 118 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 M0R1W7 72 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 RGS11O94810 467 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 RBP4P02753 201 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 OR5H8P0DN80 308 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 IGHV3-43DP0DP04 118 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 ZBTB25P24278 435 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 RFX2P48378 723 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 DYRK1AQ13627 763 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 TMEM30BQ3MIR4 351 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 SCGB2B2Q4G0G5 96 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 VAX1Q5SQQ9 334 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 FAAP20Q6NZ36 180 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 ZNF782Q6ZMW2 699 aaPredicted RBP9.87□□□□□ -0.83
UPF3A-210ENST00000493727 LYSMD2Q8IV50 215 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 OR52L2PQ8NGH6 319 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 OR4C16Q8NGL9 310 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 C7orf50Q9BRJ6 194 aaKnown RBP9.87□□□□□ -0.83
UPF3A-210ENST00000493727 TINAGL1Q9GZM7 467 aaPredicted RBP9.87□□□□□ -0.83
UPF3A-210ENST00000493727 PRDM13Q9H4Q3 707 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 HRASLSQ9HDD0 168 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 OR2S2Q9NQN1 319 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 OR1A1Q9P1Q5 309 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 JPT1Q9UK76 154 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 MMP24Q9Y5R2 645 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 KPTNQ9Y664 436 aa9.87□□□□□ -0.83
UPF3A-210ENST00000493727 IGHV3OR16-10A0A075B7F0 116 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 IGKV1-6A0A0C4DH72 117 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 FAM172BPA6NC97 362 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 NAP1L6A6NFF2 107 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 C17orf98A8MV24 154 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 NPIPB11E5RHQ5 1161 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 F2RL2O00254 374 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 DIRAS3O95661 229 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 CD74P04233 296 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 CRYBA1P05813 215 aa9.86□□□□□ -0.83
UPF3A-210ENST00000493727 CGB3P0DN86 165 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms