RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 BCL2P10415 239 aa14.09□□□□□ -0.15
BRAT1-206ENST00000493232 OR10J1P30954 320 aa14.09□□□□□ -0.15
BRAT1-206ENST00000493232 OR10J6PQ8NGY7 276 aa14.09□□□□□ -0.15
BRAT1-206ENST00000493232 PRO1933Q9H354 126 aa14.09□□□□□ -0.15
BRAT1-206ENST00000493232 IDI2-AS1Q9NZ38 188 aa14.09□□□□□ -0.15
BRAT1-206ENST00000493232 HILPDAQ9Y5L2 63 aa14.09□□□□□ -0.15
BRAT1-206ENST00000493232 KLF7O75840 302 aaPredicted RBP14.08□□□□□ -0.15
BRAT1-206ENST00000493232 STAG3L2P0CL84 134 aa14.08□□□□□ -0.15
BRAT1-206ENST00000493232 NSUN5P2Q63ZY6 315 aa14.08□□□□□ -0.15
BRAT1-206ENST00000493232 PRNTQ86SH4 94 aa14.08□□□□□ -0.15
BRAT1-206ENST00000493232 IGHV3-21A0A0B4J1V1 117 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 COX6A1P12074 109 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 IGSF11Q5DX21 431 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 ZNF880Q6PDB4 577 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 ISOC2Q96AB3 205 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 PACRGQ96M98 296 aaPredicted RBP14.08□□□□□ -0.16
BRAT1-206ENST00000493232 PIMREGQ9BSJ6 248 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 RNF115Q9Y4L5 304 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 LINC00862A6NCI5 91 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 CRXO43186 299 aaPredicted RBP14.08□□□□□ -0.16
BRAT1-206ENST00000493232 SS18L1O75177 396 aaPredicted RBP14.08□□□□□ -0.16
BRAT1-206ENST00000493232 FUT5Q11128 374 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 PPP1R3EQ9H7J1 279 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 MCM3APO60318 1980 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 PITPNC1Q9UKF7 332 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 DLEC1Q9Y238 1755 aa14.08□□□□□ -0.16
BRAT1-206ENST00000493232 A8MWL6 223 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 MEOX2P50222 304 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 RFLNBQ8N5W9 214 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 PRDM14Q9GZV8 571 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 CDC42EP3Q9UKI2 254 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 LBHQ53QV2 105 aaPredicted RBP14.07□□□□□ -0.16
BRAT1-206ENST00000493232 MIOXQ9UGB7 285 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 TUBD1Q9UJT1 453 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 HSF4Q9ULV5 492 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 ODAMA1E959 279 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 FAM90A26D6RGX4 464 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 SRSF9Q13242 221 aaKnown RBP eCLIP14.07□□□□□ -0.16
BRAT1-206ENST00000493232 MS4A3Q96HJ5 214 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 RHOVQ96L33 236 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 CALYQ9NYX4 217 aa14.07□□□□□ -0.16
BRAT1-206ENST00000493232 SHANK3Q9BYB0 1731 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 TMEM189A5PLL7 270 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 J3QW42 95 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 WNT9BO14905 357 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 SMIM10L1P0DMW3 83 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 PF4V1P10720 104 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 TMEM252Q8N6L7 170 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 SYT8Q8NBV8 401 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 SMIM10Q96HG1 83 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 TMSB15BA0A087X1C1 80 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 TRIP11Q15643 1979 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 A6NDN8 102 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 GPR132Q9UNW8 380 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 LINC00869P0C866 280 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 C16orf92Q96LL3 132 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 SOSTQ9BQB4 213 aa14.06□□□□□ -0.16
BRAT1-206ENST00000493232 ZNF430Q9H8G1 570 aaPredicted RBP14.06□□□□□ -0.16
BRAT1-206ENST00000493232 TRAV30A0A087WSZ9 112 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 SCTP09683 121 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 TRBV5-7A0A0A0MS05 114 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 TRAV20A0A0B4J274 112 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 CFDP00746 253 aaPredicted RBP14.05□□□□□ -0.16
BRAT1-206ENST00000493232 CBLN2Q8IUK8 224 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 SCARF2Q96GP6 870 aaPredicted RBP14.05□□□□□ -0.16
BRAT1-206ENST00000493232 JPT1Q9UK76 154 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 LHFPL6Q9Y693 200 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 HLA-DQB1P01920 261 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 FAM3BP58499 235 aaPredicted RBP14.05□□□□□ -0.16
BRAT1-206ENST00000493232 IGLV3-21P80748 117 aaPredicted RBP14.05□□□□□ -0.16
BRAT1-206ENST00000493232 PCOLCEQ15113 449 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 NCMAPQ5T1S8 102 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 PCSK4Q6UW60 755 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 RELBQ01201 579 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 UNQ5815/PRO19632Q6UWF5 114 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 BPIFA4PQ86YQ2 179 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 DLL3Q9NYJ7 618 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 MT-ND6P03923 174 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 VSIG10L2P0DP72 767 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 MAS1LP35410 378 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 CD81P60033 236 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 TM4SF20Q53R12 229 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 OR8A1Q8NGG7 326 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 AMELYQ99218 206 aa14.05□□□□□ -0.16
BRAT1-206ENST00000493232 SIAH2O43255 324 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 PQLC2Q6ZP29 291 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 ZNF826PQ6ZT77 177 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 FAM216AQ8WUB2 273 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 AUP1Q9Y679 476 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 M0QZK8 103 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 GGCTO75223 188 aaKnown RBP14.04□□□□□ -0.16
BRAT1-206ENST00000493232 ZNF137PP52743 207 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 CHRNA10Q9GZZ6 450 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 FAM206AQ9NX38 181 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 FOCADQ5VW36 1801 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 IGHMP01871 453 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 MFAP4P55083 255 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 GFRA1P56159 465 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 FHL5Q5TD97 284 aa14.04□□□□□ -0.16
BRAT1-206ENST00000493232 RBKSQ9H477 322 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms