RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ABHD14AQ9BUJ0 271 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 CLEC7AQ9BXN2 247 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 PARP12Q9H0J9 701 aaKnown RBP10.93□□□□□ -0.66
MSH6-208ENST00000493177 SCP2D1Q9UJQ7 156 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 IGHV2-26A0A0B4J1V2 119 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 SLC31A2O15432 143 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 ST8SIA5O15466 376 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 PLA2G10O15496 165 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 ARG1P05089 322 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 ZNF735P0CB33 412 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 LUMP51884 338 aaPredicted RBP10.92□□□□□ -0.66
MSH6-208ENST00000493177 PRRX1P54821 245 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 UBA52P62987 128 aaKnown RBP10.92□□□□□ -0.66
MSH6-208ENST00000493177 MZT2BQ6NZ67 158 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 BRD3OSQ6XYD6 125 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 ZDHHC22Q8N966 263 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 POC5Q8NA72 575 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 OR51S1Q8NGJ8 323 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 OR9G1Q8NH87 305 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 GIMAP1Q8WWP7 306 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 TOMM40LQ969M1 308 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 PRRT1Q99946 306 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 C11orf54Q9H0W9 315 aaPredicted RBP10.92□□□□□ -0.66
MSH6-208ENST00000493177 TBC1D24Q9ULP9 559 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 PSG11Q9UQ72 335 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 OR2W1Q9Y3N9 320 aa10.92□□□□□ -0.66
MSH6-208ENST00000493177 A0A087X0M5 115 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 A0A1B0GX30 115 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 DNAJC9-AS1A6NH13 148 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 RNASEK-C17orf49H0YIS7 233 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 J3QR06 171 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 PPYP01298 95 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 OR8U9P0C7N5 309 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 PGAM2P15259 253 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 RAB7AP51149 207 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 ASAH1Q13510 395 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 Q3ZCU0 254 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 DHRS11Q6UWP2 260 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 IDO2Q6ZQW0 420 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 C3orf56Q8N813 242 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 OR10X1Q8NGY0 326 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 OR8U1Q8NH10 309 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 ZNF596Q8TC21 504 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 SECTM1Q8WVN6 248 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 TNFRSF14Q92956 283 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 TOLLIPQ9H0E2 274 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 UNKLQ9H9P5 680 aaKnown RBP10.91□□□□□ -0.66
MSH6-208ENST00000493177 PALMDQ9NP74 551 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 ESM1Q9NQ30 184 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 RNF150Q9ULK6 438 aa10.91□□□□□ -0.66
MSH6-208ENST00000493177 FBN1P35555 2871 aaKnown RBP10.91□□□□□ -0.66
MSH6-208ENST00000493177 OR5H14A6NHG9 310 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 HSD17B6O14756 317 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 TUSC2O75896 110 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 IL3RAP26951 378 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 CD34P28906 385 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 GPR12P47775 334 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 CCR6P51684 374 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 ZNF134P52741 427 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 LGALS4P56470 323 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 BPIFB3P59826 476 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 CT45A1Q5HYN5 189 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 LY6G6FQ5SQ64 297 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 RUSC1-AS1Q66K80 236 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 HCP5Q6MZN7 132 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 LYG1Q8N1E2 194 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 ZNF439Q8NDP4 499 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 TERB2Q8NHR7 220 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 CT45A3Q8NHU0 189 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 ENKURQ8TC29 256 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 MOB3AQ96BX8 217 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 ABHD14BQ96IU4 210 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 ZNF48Q96MX3 618 aaPredicted RBP10.9□□□□□ -0.66
MSH6-208ENST00000493177 SLC5A7Q9GZV3 580 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 FXYD6Q9H0Q3 95 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 OR2D2Q9H210 308 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 TNFRSF19Q9NS68 423 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 ZNRD1Q9P1U0 126 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 ZNF221Q9UK13 617 aa10.9□□□□□ -0.66
MSH6-208ENST00000493177 AMMECR1Q9Y4X0 333 aaPredicted RBP10.9□□□□□ -0.66
MSH6-208ENST00000493177 SVEP1Q4LDE5 3571 aa10.9□□□□□ -0.67
MSH6-208ENST00000493177 IGKV1D-13A0A0B4J2D9 117 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 CENPVL3A0A0U1RRI6 287 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 MDFIC2A0A1B0GVS7 189 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 FAM240BA0A1B0GVZ2 78 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 ITGB1BP1O14713 200 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 IGKV1-13P0DP09 117 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 UBE2E1P51965 193 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 HLA-DRB5Q30154 266 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 ZNF660Q6AZW8 331 aaPredicted RBP10.89□□□□□ -0.67
MSH6-208ENST00000493177 SLC25A48Q6ZT89 311 aaKnown RBP10.89□□□□□ -0.67
MSH6-208ENST00000493177 LINC00311Q8N616 119 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 BEND2Q8NDZ0 799 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 OR11H6Q8NGC7 330 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 CREB3L1Q96BA8 519 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 MMP28Q9H239 520 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 DPAGT1Q9H3H5 408 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 SLC2A8Q9NY64 477 aa10.89□□□□□ -0.67
MSH6-208ENST00000493177 IGHV1-69DA0A0B4J2H0 117 aa10.88□□□□□ -0.67
MSH6-208ENST00000493177 TMEM89A2RUT3 159 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms