RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SYT7O43581 403 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 HPRP00739 348 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 HLA-DQA2P01906 255 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 IGHV4-38-2P0DP08 117 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 HLA-DOBP13765 273 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 ALOX5APP20292 161 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 FMO3P31513 532 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 MAP2K4P45985 399 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 TPTEP56180 551 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 TCTAP57738 103 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 PKIAP61925 76 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 CDK10Q15131 360 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 RPEL1Q2QD12 228 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 SNAI3Q3KNW1 292 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 FAM78BQ5VT40 261 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 SMARCD3Q6STE5 483 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 MOB3BQ86TA1 216 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 LDLRAD3Q86YD5 345 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 PAQR4Q8N4S7 273 aaPredicted RBP5.58□□□□□ -1.52
HDAC3-209ENST00000486618 ARRDC1Q8N5I2 433 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 TMEM86BQ8N661 226 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 TMEM217Q8N7C4 229 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 GDPD1Q8N9F7 314 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 OR52N4Q8NGI2 321 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 OR6K6Q8NGW6 343 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 FGFBP3Q8TAT2 258 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 ASB10Q8WXI3 467 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 UPRTQ96BW1 309 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 SDSLQ96GA7 329 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 SEBOXQ9HB31 216 aaPredicted RBP5.58□□□□□ -1.52
HDAC3-209ENST00000486618 WFDC1Q9HC57 220 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 A4GALTQ9NPC4 353 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 NOX4Q9NPH5 578 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 TMEM38BQ9NVV0 291 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 COPZ2Q9P299 210 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 SAMD4AQ9UPU9 718 aaKnown RBP5.58□□□□□ -1.52
HDAC3-209ENST00000486618 C14orf166Q9Y224 244 aaKnown RBP5.58□□□□□ -1.52
HDAC3-209ENST00000486618 RBM7Q9Y580 266 aaKnown RBP5.58□□□□□ -1.52
HDAC3-209ENST00000486618 IGHV3OR16-10A0A075B7F0 116 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 TRAV40A0A0B4J280 105 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 KIR2DS1A0A191URI9 304 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 A0A1B0GWA3 101 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 RPS10-NUDT3A0A1W2PQS6 291 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 IGSF23A1L1A6 192 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 TVP23AA6NH52 213 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 ACOT8O14734 319 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 PIN1P1O15428 100 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 NUDT3O95989 172 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 PTTG1O95997 202 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 C1QCP02747 245 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 TYMSP04818 313 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 CD55P08174 381 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 ALDOCP09972 364 aaKnown RBP5.57□□□□□ -1.52
HDAC3-209ENST00000486618 MUC1P15941 1255 aaPredicted RBP5.57□□□□□ -1.52
HDAC3-209ENST00000486618 SELEP16581 610 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 PVALBP20472 110 aaPredicted RBP5.57□□□□□ -1.52
HDAC3-209ENST00000486618 DDTP30046 118 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 P2RY1P47900 373 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 SULT1A1P50225 295 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 SULT1A2P50226 295 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF84P51523 738 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 BIDP55957 195 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 GNG3P63215 75 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 TNFAIP6P98066 277 aaPredicted RBP5.57□□□□□ -1.52
HDAC3-209ENST00000486618 HOXC5Q00444 222 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 PRKCDQ05655 676 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 KIR2DS1Q14954 304 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 OR8G1Q15617 311 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 DEFB112Q30KQ8 113 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 ALG10BQ5I7T1 473 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 SOHLH1Q5JUK2 328 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 TMEM65Q6PI78 240 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 OR4K5Q8NGD3 323 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 OR6M1Q8NGM8 313 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 SLC38A5Q8WUX1 472 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 TMEM54Q969K7 222 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 RNF183Q96D59 192 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 TMEM19Q96HH6 336 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 BTF3L4Q96K17 158 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF582Q96NG8 517 aaPredicted RBP5.57□□□□□ -1.52
HDAC3-209ENST00000486618 OR8B4Q96RC9 309 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 ACTR3CQ9C0K3 210 aaPredicted RBP5.57□□□□□ -1.52
HDAC3-209ENST00000486618 DPAGT1Q9H3H5 408 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 TNFRSF19Q9NS68 423 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 TMEM106BQ9NUM4 274 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 UFC1Q9Y3C8 167 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 CHST2Q9Y4C5 530 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 PLXNB1O43157 2135 aa5.57□□□□□ -1.52
HDAC3-209ENST00000486618 IGKV1D-42A0A075B6H8 117 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 TRAV18A0A075B6X5 111 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 C5orf63A6NC05 138 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 H3BSA7 217 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 DIRAS1O95057 198 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 IGF2P01344 180 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 IFNA17P01571 189 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 IGHG4P01861 327 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 C1QBP02746 253 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 BGLAPP02818 100 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 RLN2P04090 185 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 OR8U8P0C7N1 319 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms