RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 KIRREL1Q96J84 757 aa13.87□□□□□ -0.19
VIM-205ENST00000485947 SCGB3A2Q96PL1 93 aa13.87□□□□□ -0.19
VIM-205ENST00000485947 DUX5Q96PT3 197 aa13.87□□□□□ -0.19
VIM-205ENST00000485947 ZNF2Q9BSG1 426 aaPredicted RBP13.87□□□□□ -0.19
VIM-205ENST00000485947 TOLLIPQ9H0E2 274 aa13.87□□□□□ -0.19
VIM-205ENST00000485947 C20orf85Q9H1P6 137 aa13.87□□□□□ -0.19
VIM-205ENST00000485947 MMP28Q9H239 520 aa13.87□□□□□ -0.19
VIM-205ENST00000485947 FAM96BQ9Y3D0 163 aa13.87□□□□□ -0.19
VIM-205ENST00000485947 IGKV1-6A0A0C4DH72 117 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 hCG_1809904A0A1W2PP81 198 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 A0A1W2PPE2 198 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 A0A1W2PR64 198 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 A0A1W2PRV1 198 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 C15orf65H3BRN8 121 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 BET1O15155 118 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 NDUFA7O95182 113 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 FBP1P09467 338 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 CGB3P0DN86 165 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 CGB7P0DN87 165 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 RUSC1-AS1Q66K80 236 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 Q8N7P7 452 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 OR4F5Q8NH21 305 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 TNFRSF14Q92956 283 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 GAL3ST2Q9H3Q3 398 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 LINC00574Q9H8X3 128 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 NUDT15Q9NV35 164 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 CALYQ9NYX4 217 aa13.86□□□□□ -0.19
VIM-205ENST00000485947 SOX21Q9Y651 276 aaPredicted RBP13.86□□□□□ -0.19
VIM-205ENST00000485947 KBTBD11-OT1A0A1B0GTJ5 212 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 MDFIC2A0A1B0GVS7 189 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 INMT-MINDY4F8WBC2 141 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 F2RL2O00254 374 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 TUSC2O75896 110 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 H2AFB2P0C5Z0 115 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 ZBTB25P24278 435 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 FCGR2CP31995 323 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 SSTR5P35346 364 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 IER3P46695 156 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 HERV-K104P61576 105 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 TCF23Q7RTU1 214 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 H1FOOQ8IZA3 346 aaPredicted RBP13.85□□□□□ -0.19
VIM-205ENST00000485947 FGFRL1Q8N441 504 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 PRR18Q8N4B5 295 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 OR10A7Q8NGE5 316 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 OR1L1Q8NH94 360 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 IL1F10Q8WWZ1 152 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 SLC23A1Q9UHI7 598 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 JPT1Q9UK76 154 aa13.85□□□□□ -0.19
VIM-205ENST00000485947 TENM1Q9UKZ4 2725 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 FAM181BA6NEQ2 426 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 NPFFO15130 113 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 HSPA12AO43301 675 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 PRAF2O60831 178 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 DHFRP00374 187 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 PPYP01298 95 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 MECP2P51608 486 aaKnown RBP13.84□□□□□ -0.19
VIM-205ENST00000485947 UCP3P55916 312 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 MIDNQ504T8 468 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 AADACL3Q5VUY0 350 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 MRGPRFQ96AM1 343 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 MOB3AQ96BX8 217 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 BEX1Q9HBH7 125 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 C19orf12Q9NSK7 152 aa13.84□□□□□ -0.19
VIM-205ENST00000485947 TRAV6A0A075B6T7 132 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 A0A0U1RQK1 487 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 BTBD17A6NE02 478 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 OR5H14A6NHG9 310 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 VGLL3A8MV65 326 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 RNASEK-C17orf49H0YIS7 233 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 ARPC1BO15143 372 aaKnown RBP13.83□□□□□ -0.2
VIM-205ENST00000485947 PEX14O75381 377 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 C17orf58Q2M2W7 97 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 LPCAT3Q6P1A2 487 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 C5orf24Q7Z6I8 188 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 FAM185AQ8N0U4 392 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 OR52M1Q8NGK5 317 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 OR5R1Q8NH85 324 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 ZFAND1Q8TCF1 268 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 MARCH1Q8TCQ1 289 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 ZNF714Q96N38 554 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 CHIAQ9BZP6 476 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 FXYD6Q9H0Q3 95 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 ALX4Q9H161 411 aaPredicted RBP13.83□□□□□ -0.2
VIM-205ENST00000485947 HEXA-AS1Q9H8Q6 139 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 SIRT7Q9NRC8 400 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 GPR132Q9UNW8 380 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 OR2W1Q9Y3N9 320 aa13.83□□□□□ -0.2
VIM-205ENST00000485947 FAM172BPA6NC97 362 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 RGS11O94810 467 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 RBP4P02753 201 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 PGAM2P15259 253 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 AADACP22760 399 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 NFYAP23511 347 aaPredicted RBP13.82□□□□□ -0.2
VIM-205ENST00000485947 TAS2R31P59538 309 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 ZNF273Q14593 569 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 AANATQ16613 207 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 LY6G6FQ5SQ64 297 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 TMEM200BQ69YZ2 307 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 OR2S2Q9NQN1 319 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 IDI2-AS1Q9NZ38 188 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms