RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 AUP1Q9Y679 476 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 POMT1Q9Y6A1 747 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 PRR14LQ5THK1 2151 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 MGAQ8IWI9 3026 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 C2CD3Q4AC94 2353 aa5.57□□□□□ -1.52
LDB3-206ENST00000477489 UBR5O95071 2799 aaPredicted RBP5.56□□□□□ -1.52
LDB3-206ENST00000477489 IGKV1D-13A0A0B4J2D9 117 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 A0A1B0GU03 582 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 ZNF729A6NN14 1252 aaPredicted RBP5.56□□□□□ -1.52
LDB3-206ENST00000477489 FAM90A9PA6NNJ1 464 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 NUDT19A8MXV4 375 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 SHISA9B4DS77 424 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 C15orf65H3BRN8 121 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 K7EPK0 472 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 WNT9BO14905 357 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 SIGLEC5O15389 551 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 RBFOX2O43251 390 aaKnown RBP eCLIP5.56□□□□□ -1.52
LDB3-206ENST00000477489 HBZP02008 142 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 SERPINE2P07093 398 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 IGKV1-13P0DP09 117 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 TPT1P13693 172 aaKnown RBP5.56□□□□□ -1.52
LDB3-206ENST00000477489 SSTR2P30874 369 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 CEACAM6P40199 344 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 PPOXP50336 477 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 MRPS11P82912 194 aaKnown RBP5.56□□□□□ -1.52
LDB3-206ENST00000477489 TLE1Q04724 770 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 BAXQ07812 192 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 AESQ08117 197 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 RAB32Q13637 225 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 NMSQ5H8A3 153 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 TMEM268Q5VZI3 342 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 VHLLQ6RSH7 139 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 ZNF788Q6ZQV5 615 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 SELENOHQ8IZQ5 122 aaKnown RBP5.56□□□□□ -1.52
LDB3-206ENST00000477489 SLC35G3Q8N808 338 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 OR4D5Q8NGN0 318 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 IL1F10Q8WWZ1 152 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 ST8SIA2Q92186 375 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 RAB39BQ96DA2 213 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 CYYR1Q96J86 154 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 TP53RKQ96S44 253 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 TMEM204Q9BSN7 226 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 SAP30LQ9HAJ7 183 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 KCNJ16Q9NPI9 418 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 CCL28Q9NRJ3 127 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 TAS2R3Q9NYW6 316 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 KAAG1Q9UBP8 84 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 SH3BGRL2Q9UJC5 107 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 RBM7Q9Y580 266 aaKnown RBP5.56□□□□□ -1.52
LDB3-206ENST00000477489 CREBBPQ92793 2442 aa5.56□□□□□ -1.52
LDB3-206ENST00000477489 DYSFO75923 2080 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 DSCAML1Q8TD84 2053 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 PPIAL4EA0A075B759 164 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 TRGV10A0A0A0MS01 117 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.55□□□□□ -1.52
LDB3-206ENST00000477489 RPS10-NUDT3A0A1W2PQS6 291 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 hADV38S2A0JD32 116 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 PPIAL4DF5H284 164 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 H0YIZ8 118 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 HSD17B6O14756 317 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 GPR137BO60478 399 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 PITX3O75364 302 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 JTBO76095 146 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 IGLV2-14P01704 120 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 PPIAL4FP0DN26 164 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 CGB3P0DN86 165 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 CGB7P0DN87 165 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 EGR1P18146 543 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 KIR2DS2P43631 304 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 NKX2-1P43699 371 aaPredicted RBP5.55□□□□□ -1.52
LDB3-206ENST00000477489 ADORA2A-AS1P86434 159 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 EIF4EBP1Q13541 118 aaPredicted RBP5.55□□□□□ -1.52
LDB3-206ENST00000477489 LRRC37A5PQ49AS3 106 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 HIST2H2BCQ6DN03 193 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 CDPF1Q6NVV7 123 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 C22orf34Q6ZV56 151 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 LYZL2Q7Z4W2 148 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 BAP18Q8IXM2 172 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 OR8H3Q8N146 312 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 C8orf31Q8N9H6 132 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 OR1S1Q8NH92 325 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 CA5BP1Q8WTZ4 195 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 ARL11Q969Q4 196 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 PLPPR2Q96GM1 343 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 ADTRPQ96IZ2 230 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 RAB40CQ96S21 281 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 SLC25A31Q9H0C2 315 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 DYNLRB1Q9NP97 96 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 OR2S2Q9NQN1 319 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 GSKIPQ9P0R6 139 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 OR1A1Q9P1Q5 309 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 PPIAL4AQ9Y536 164 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 MMP24Q9Y5R2 645 aa5.55□□□□□ -1.52
LDB3-206ENST00000477489 TRBV23-1A0A0A0MS06 115 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 KBTBD11-OT1A0A1B0GTJ5 212 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 F5H0A9 414 aaPredicted RBP5.54□□□□□ -1.52
LDB3-206ENST00000477489 TMEM178BH3BS89 294 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 MED6O75586 246 aa5.54□□□□□ -1.52
LDB3-206ENST00000477489 MBPP02686 304 aaPredicted RBP5.54□□□□□ -1.52
LDB3-206ENST00000477489 OR8U9P0C7N5 309 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms