RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 MLNRO43193 412 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 TNFSF13O75888 250 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 CECR9P0C854 216 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 CEBPDP49716 269 aaPredicted RBP13.49□□□□□ -0.25
VARS2-207ENST00000476162 ASCL1P50553 236 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 PDZD11Q5EBL8 140 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 ZNF826PQ6ZT77 177 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 ZADH2Q8N4Q0 377 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 OR2C3Q8N628 320 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 OR8G5Q8NG78 346 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 OR51H1Q8NH63 302 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 OPN3Q9H1Y3 402 aaPredicted RBP13.49□□□□□ -0.25
VARS2-207ENST00000476162 FZR1Q9UM11 496 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 BOD1L1Q8NFC6 3051 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 DUXBA0A1W2PPF3 345 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 TMEM210A6NLX4 147 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 PTBP3O95758 552 aaKnown RBP13.48□□□□□ -0.25
VARS2-207ENST00000476162 S100GP29377 79 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 IL2RGP31785 369 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 HOXA4Q00056 320 aaPredicted RBP13.48□□□□□ -0.25
VARS2-207ENST00000476162 EWSR1Q01844 656 aaKnown RBP eCLIP13.48□□□□□ -0.25
VARS2-207ENST00000476162 TCF15Q12870 199 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 COMMD1Q8N668 190 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 OR10V1Q8NGI7 309 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 UNKLQ9H9P5 680 aaKnown RBP13.48□□□□□ -0.25
VARS2-207ENST00000476162 OR14J1Q9UGF5 321 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 CLEC18AA5D8T8 446 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 EREGO14944 169 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 SSSCA1O60232 199 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 FABP4P15090 132 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 TESK1Q15569 626 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 MOB1BQ7L9L4 216 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 CLEC18CQ8NCF0 446 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 STARD4Q96DR4 205 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 GINS3Q9BRX5 216 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 FAM212BQ9NTI7 297 aaPredicted RBP13.48□□□□□ -0.25
VARS2-207ENST00000476162 TAAR3PQ9P1P4 343 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 LAMA5O15230 3695 aa13.48□□□□□ -0.25
VARS2-207ENST00000476162 NPIPB11E5RHQ5 1161 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.47□□□□□ -0.25
VARS2-207ENST00000476162 WNT9BO14905 357 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 HSPA12AO43301 675 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 NXPH3O95157 252 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 TSPAN15O95858 294 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 HAND1O96004 215 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 IGLV2-14P01704 120 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 SEC11BP0C7V7 166 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 FABP6P51161 128 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 ZNF674Q2M3X9 581 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 SEM1Q6ZVN7 128 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 C11orf53Q8IXP5 236 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 IL22RA2Q969J5 263 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 SH3BGRL3Q9H299 93 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 ZNF71Q9NQZ8 489 aaPredicted RBP13.47□□□□□ -0.25
VARS2-207ENST00000476162 SIRT7Q9NRC8 400 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 PROCRQ9UNN8 238 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 MMP24Q9Y5R2 645 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 INTS1Q8N201 2190 aaKnown RBP13.47□□□□□ -0.25
VARS2-207ENST00000476162 RIF1Q5UIP0 2472 aaKnown RBP13.47□□□□□ -0.25
VARS2-207ENST00000476162 ZNF292O60281 2723 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 IGSF23A1L1A6 192 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 PSPNO60542 156 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 PSG2P11465 335 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 ID3Q02535 119 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 HSD17B11Q8NBQ5 300 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 HES4Q9HCC6 221 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 C19orf12Q9NSK7 152 aa13.47□□□□□ -0.25
VARS2-207ENST00000476162 MBNL3Q9NUK0 354 aaKnown RBP13.47□□□□□ -0.25
VARS2-207ENST00000476162 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.46□□□□□ -0.25
VARS2-207ENST00000476162 A0A0G2JRQ6 117 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 PROB1E7EW31 1015 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 PHOX2AO14813 284 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 TIMM8AO60220 97 aaPredicted RBP13.46□□□□□ -0.25
VARS2-207ENST00000476162 CGAP01215 116 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 OMGP23515 440 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 MIDNQ504T8 468 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 ZNF664Q8N3J9 261 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 CD300LFQ8TDQ1 290 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 R3HDM4Q96D70 268 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 EIF5A2Q9GZV4 153 aaKnown RBP13.46□□□□□ -0.25
VARS2-207ENST00000476162 MSL2Q9HCI7 577 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 PPP1R3CQ9UQK1 317 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 WIPI2Q9Y4P8 454 aa13.46□□□□□ -0.25
VARS2-207ENST00000476162 GTF3C1Q12789 2109 aa13.46□□□□□ -0.26
VARS2-207ENST00000476162 TMEM50AO95807 157 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 IGLV1-44P01699 117 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 SERPINE2P07093 398 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 CXCL1P09341 107 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 PRAMEF6Q5VXH4 476 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 Q6ZR03 302 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 TMEM252Q8N6L7 170 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 SLC35B3Q9H1N7 401 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 CXXC4Q9H2H0 198 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 PLEKHF2Q9H8W4 249 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 RBM7Q9Y580 266 aaKnown RBP13.45□□□□□ -0.26
VARS2-207ENST00000476162 IGHV1-18A0A0C4DH31 117 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 DANCRP0C864 163 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 FHITP49789 147 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 VAMP2P63027 116 aa13.45□□□□□ -0.26
VARS2-207ENST00000476162 NKX6-1P78426 367 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms