RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 CELA3AP09093 270 aa18■□□□□ 0.47
SH3D21-202ENST00000474766 VDAC1P21796 283 aa18■□□□□ 0.47
SH3D21-202ENST00000474766 PCP4P48539 62 aa18■□□□□ 0.47
SH3D21-202ENST00000474766 ARF1P84077 181 aaKnown RBP18■□□□□ 0.47
SH3D21-202ENST00000474766 Q6ZS49 121 aa18■□□□□ 0.47
SH3D21-202ENST00000474766 PIGCQ92535 297 aa18■□□□□ 0.47
SH3D21-202ENST00000474766 OR14J1Q9UGF5 321 aa18■□□□□ 0.47
SH3D21-202ENST00000474766 PDCD6O75340 191 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 TMEM50AO95807 157 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 PFN1P07737 140 aaKnown RBP17.99■□□□□ 0.47
SH3D21-202ENST00000474766 ZNF787Q6DD87 383 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 IGFL2Q6UWQ7 119 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 Q8NFD4 153 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 PLA2G3Q9NZ20 509 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 SNRPCP09234 159 aaKnown RBP17.99■□□□□ 0.47
SH3D21-202ENST00000474766 GNRHRP30968 328 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 RBM11P57052 281 aaKnown RBP17.99■□□□□ 0.47
SH3D21-202ENST00000474766 COL10A1Q03692 680 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 MALLQ13021 153 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 DAZAP2Q15038 168 aaPredicted RBP17.99■□□□□ 0.47
SH3D21-202ENST00000474766 SRSF7Q16629 238 aaKnown RBP eCLIP17.99■□□□□ 0.47
SH3D21-202ENST00000474766 CENPVQ7Z7K6 275 aaPredicted RBP17.99■□□□□ 0.47
SH3D21-202ENST00000474766 TBC1D26Q86UD7 250 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 PLPPR1Q8TBJ4 325 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 PSMG3Q9BT73 122 aaPredicted RBP17.99■□□□□ 0.47
SH3D21-202ENST00000474766 HES7Q9BYE0 225 aa17.99■□□□□ 0.47
SH3D21-202ENST00000474766 IL18BPO95998 194 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 UCP1P25874 307 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 CCKARP32238 428 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 SRYQ05066 204 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 TNFRSF9Q07011 255 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 MRGPRGQ86SM5 289 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 CALHM1Q8IU99 346 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 TMEM217Q8N7C4 229 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 DYRK2Q92630 601 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 REPIN1Q9BWE0 567 aaKnown RBP17.98■□□□□ 0.47
SH3D21-202ENST00000474766 MAGT1Q9H0U3 335 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 NAT8Q9UHE5 227 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 RNF115Q9Y4L5 304 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 IFNA1P01562 189 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 ZNF154Q13106 437 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 RNPS1Q15287 305 aaKnown RBP17.98■□□□□ 0.47
SH3D21-202ENST00000474766 OR1C1Q15619 314 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 BRICD5Q6PL45 260 aa17.98■□□□□ 0.47
SH3D21-202ENST00000474766 RBMXL3Q8N7X1 1067 aaKnown RBP17.98■□□□□ 0.47
SH3D21-202ENST00000474766 FREM1Q5H8C1 2179 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 XKRY2A2RUG3 117 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 CHST1O43916 411 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 ZNF880Q6PDB4 577 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 IGFL3Q6UXB1 125 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 THNSL2Q86YJ6 484 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 TUSC5Q8IXB3 177 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 TMEM170AQ8WVE7 144 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 HIST1H2AAQ96QV6 131 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 TTTY12Q9BZ98 90 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 ABI3Q9P2A4 366 aa17.97■□□□□ 0.47
SH3D21-202ENST00000474766 FAM221AA4D161 298 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 COX5BP10606 129 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 SLC25A6P12236 298 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 PAX9P55771 341 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 FAM3BP58499 235 aaPredicted RBP17.96■□□□□ 0.47
SH3D21-202ENST00000474766 MPV17LQ2QL34 196 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 WDR25Q64LD2 544 aaPredicted RBP17.96■□□□□ 0.47
SH3D21-202ENST00000474766 Q6ZPA2 131 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 CYP2G1PQ6ZSU1 146 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 ZNF611Q8N823 705 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 NAXEQ8NCW5 288 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 ZFP92A6NM28 416 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 PPP5D1E7EU14 171 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 MAGEA5P43359 124 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 IQCJQ1A5X6 159 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 ZNF843Q8N446 348 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 OR5D13Q8NGL4 314 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 TMEM18Q96B42 140 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 ZNF665Q9H7R5 613 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 RPRMQ9NS64 109 aa17.96■□□□□ 0.47
SH3D21-202ENST00000474766 SYNGR4O95473 234 aa17.95■□□□□ 0.46
SH3D21-202ENST00000474766 SERF2P84101 59 aa17.95■□□□□ 0.46
SH3D21-202ENST00000474766 MRPL52Q86TS9 123 aaKnown RBP17.95■□□□□ 0.46
SH3D21-202ENST00000474766 SCGB1C1Q8TD33 95 aa17.95■□□□□ 0.46
SH3D21-202ENST00000474766 R3HDM4Q96D70 268 aa17.95■□□□□ 0.46
SH3D21-202ENST00000474766 RAB40CQ96S21 281 aa17.95■□□□□ 0.46
SH3D21-202ENST00000474766 SHANK1Q9Y566 2161 aa17.95■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A10PA6NDY2 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A18PA6NE21 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A16PA6NEW6 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A20PA6NIJ5 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A8PA6NJQ4 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A7PA6NKC0 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM166BA8MTA8 275 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 ZNF705GA8MUZ8 300 aaPredicted RBP17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A22PA8MWA6 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A12PA8MX19 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A5PA8MXJ8 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A23PA8MXZ1 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 EREGO14944 169 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A15PP0C7V4 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A13PP0C7W8 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A14PP0C7W9 464 aa17.94■□□□□ 0.46
SH3D21-202ENST00000474766 FAM90A24PP0C7X0 464 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms