RNA–Protein interactions for RNA: ENST00000473883.5

HCLS1-205, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 2

Gene HCLS1, Length 2,710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-205	ENST00000473883		A0A1W2PPC4	97 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	TMEM8B	A6NDV4	472 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	TNF	P01375	233 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	C8orf88	P0DMB2	117 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	CT45A6	P0DMU7	189 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	CT45A5	P0DMU8	189 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	CT45A7	P0DMV0	189 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	RPL7	P18124	248 aa	Known RBP	10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	CST5	P28325	142 aa	Predicted RBP	10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	GRPR	P30550	384 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	ACVRL1	P37023	503 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	CLDN6	P56747	220 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	MFAP5	Q13361	173 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	ZNF146	Q15072	292 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	CT45A1	Q5HYN5	189 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	SP8	Q8IXZ3	490 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	GCSAM	Q8N6F7	178 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	TMEM99	Q8N816	258 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	OR51A4	Q8NGJ6	313 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	CT45A3	Q8NHU0	189 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	FLYWCH2	Q96CP2	140 aa	Known RBP	10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	OR7C1	O76099	320 aa	Predicted RBP	10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	CPSF4	O95639	269 aa	Known RBP	10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	JMJD7	P0C870	316 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	FABP2	P12104	132 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	FST	P19883	344 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	PDE7A	Q13946	482 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	SPATA12	Q7Z6I5	190 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	OR5D14	Q8NGL3	314 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	NAT6	Q93015	286 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	SRSF8	Q9BRL6	282 aa	Known RBP	10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	FAM103A1	Q9BTL3	118 aa	Known RBP	10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	EBPL	Q9BY08	206 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	LHX3	Q9UBR4	397 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	ZNF257	Q9Y2Q1	563 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	KCNE3	Q9Y6H6	103 aa		10.8	□□□□□ -0.68
HCLS1-205	ENST00000473883	TRAV18	A0A075B6X5	111 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	MEIS3P1	A6NDR6	274 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883		J3QLI3	93 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	ISLR	O14498	428 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	CXCL10	P02778	98 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	REG1B	P48304	166 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	TMEM150A	Q86TG1	271 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	ZDHHC23	Q8IYP9	409 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	FAM174A	Q8TBP5	190 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	MSI2	Q96DH6	328 aa	Known RBP	10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	OR2D2	Q9H210	308 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	HES4	Q9HCC6	221 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	HRASLS2	Q9NWW9	162 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883		A0A0G2JLL6	359 aa	Predicted RBP	10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	FAM90A27P	A6NNH2	459 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	TMPRSS2	O15393	492 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	SRD5A1	P18405	259 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	CDK5R1	Q15078	307 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	LRRC25	Q8N386	305 aa	Predicted RBP	10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	SYT8	Q8NBV8	401 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	CENPF	P49454	3210 aa		10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	MKI67	P46013	3256 aa	Known RBP	10.79	□□□□□ -0.68
HCLS1-205	ENST00000473883	SHISA7	A6NL88	538 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	FNDC10	F2Z333	226 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	MT-CO3	P00414	261 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	PPIF	P30405	207 aa	Known RBP	10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	VDAC2	P45880	294 aa	Predicted RBP	10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	10.78	□□□□□ -0.68	3e-7	■■□□□ 13.2
HCLS1-205	ENST00000473883	ZNF433	Q8N7K0	673 aa	Predicted RBP	10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	KCNS1	Q96KK3	526 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	DUX3	Q96PT4	197 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	CDX2	Q99626	313 aa	Predicted RBP	10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	ADM5	C9JUS6	153 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883		J3KT08	172 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883		J3QLW9	94 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	PIN1P1	O15428	100 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	SOCS1	O15524	211 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	HIST1H1D	P16402	221 aa	Known RBP	10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	NDUFV3	P56181	108 aa	Known RBP	10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	RPL23	P62829	140 aa	Known RBP	10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	AGER	Q15109	404 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883		Q499Y3	187 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	BORCS7	Q96B45	105 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	NUDT4	Q9NZJ9	180 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883		A0A1B0GX51	115 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	MED19	A0JLT2	244 aa	Predicted RBP	10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	NPIPB13	A6NJU9	1138 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	NPIPB4	C9JG80	1138 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	STK17B	O94768	372 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	CA2	P00918	260 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	BCL2	P10415	239 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	PVR	P15151	417 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	CRYBB3	P26998	211 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	PSG4	Q00888	419 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	MRPL30	Q8TCC3	161 aa	Known RBP	10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	MAP1LC3A	Q9H492	121 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	DUSP13	Q9UII6	198 aa		10.78	□□□□□ -0.68
HCLS1-205	ENST00000473883	BRCA2	P51587	3418 aa		10.77	□□□□□ -0.69
HCLS1-205	ENST00000473883	RHOD	O00212	210 aa		10.77	□□□□□ -0.69
HCLS1-205	ENST00000473883	PHF1	O43189	567 aa	Predicted RBP	10.77	□□□□□ -0.69
HCLS1-205	ENST00000473883	COL9A1	P20849	921 aa		10.77	□□□□□ -0.69
HCLS1-205	ENST00000473883	CFP	P27918	469 aa		10.77	□□□□□ -0.69
HCLS1-205	ENST00000473883	GPR183	P32249	361 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms