RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 STRADBQ9C0K7 418 aa12.06□□□□□ -0.48
NHLRC3-204ENST00000473371 OR51B6Q9H340 312 aa12.06□□□□□ -0.48
NHLRC3-204ENST00000473371 DEPPQ9NTK1 212 aa12.06□□□□□ -0.48
NHLRC3-204ENST00000473371 TRAPPC2LQ9UL33 140 aa12.06□□□□□ -0.48
NHLRC3-204ENST00000473371 TNRC6AQ8NDV7 1962 aaKnown RBP12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 CTXND1A0A1B0GTU2 59 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 ZNF503-AS2A6NEH8 195 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 LILRA1O75019 489 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 SNRPCP09234 159 aaKnown RBP12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 APLNRP35414 380 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 FAM3BP58499 235 aaPredicted RBP12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 GNG3P63215 75 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 LYSMD4Q5XG99 296 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 GATAD1Q8WUU5 269 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 TMEM170AQ8WVE7 144 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 FUT9Q9Y231 359 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 SIRPB1O00241 398 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 CXCL12P48061 93 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 NUBP1P53384 320 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 FGFRL1Q8N441 504 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 NDUFAF3Q9BU61 184 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 PINLYPA6NC86 204 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 NPIPB11E5RHQ5 1161 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 RHBDL1O75783 438 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 GYPAP02724 150 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 COX5BP10606 129 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 IGFBP7Q16270 282 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 TMEM14EPQ6UXP3 125 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 OR5T1Q8NG75 326 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 OR10G9Q8NGN4 311 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 OR10G7Q8NGN6 311 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 OR2T10Q8NGZ9 312 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 LINC00470Q9BZP3 86 aa12.05□□□□□ -0.48
NHLRC3-204ENST00000473371 ARHGAP21Q5T5U3 1957 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 TNRC18O15417 2968 aaPredicted RBP12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 OR5B21A6NL26 309 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 CENPVQ7Z7K6 275 aaPredicted RBP12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 TUSC5Q8IXB3 177 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 TMEM18Q96B42 140 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 ANAPC16Q96DE5 110 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 FAM90A26D6RGX4 464 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 GFRA1P56159 465 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 PLP2Q04941 152 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 MOB1BQ7L9L4 216 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 TP53TG5Q9Y2B4 290 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 MPC1Q9Y5U8 109 aa12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 DIDO1Q9BTC0 2240 aaKnown RBP12.04□□□□□ -0.48
NHLRC3-204ENST00000473371 HOXA6P31267 233 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 CEACAM6P40199 344 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 TNFRSF9Q07011 255 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 Q0VFX4 171 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 FFAR4Q5NUL3 377 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 ALKBH2Q6NS38 261 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 MRPL41Q8IXM3 137 aaKnown RBP12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 DRAM1Q8N682 238 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 DDA1Q9BW61 102 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 MANBALQ9NQG1 85 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 A0A1W2PR80 420 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 K7ESF4 209 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 CA6P23280 308 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 Q6P435 159 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 TGIF2LXQ8IUE1 241 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 POM121L2Q96KW2 1035 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 TMEM147Q9BVK8 224 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 IGKV3D-15A0A087WSY6 115 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 SS18L1O75177 396 aaPredicted RBP12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 MBP02144 154 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 PMP22Q01453 160 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 ESPL1Q14674 2120 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 SLC10A1Q14973 349 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 ACOT6Q3I5F7 207 aaPredicted RBP12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 ACTL10Q5JWF8 245 aa12.03□□□□□ -0.48
NHLRC3-204ENST00000473371 RNF212BA8MTL3 300 aa12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 PAGE4O60829 102 aa12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 ARR3P36575 388 aa12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 CYB561P49447 251 aa12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 PDLIM4P50479 330 aa12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 RPS16P62249 146 aaKnown RBP12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 ATP6V1FQ16864 119 aa12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 BEND2Q8NDZ0 799 aa12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 NEIL1Q96FI4 390 aaPredicted RBP12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 OR6C3Q9NZP0 311 aa12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 CLN8Q9UBY8 286 aa12.02□□□□□ -0.48
NHLRC3-204ENST00000473371 KRASP01116 189 aa12.02□□□□□ -0.49
NHLRC3-204ENST00000473371 COX5AP20674 150 aa12.02□□□□□ -0.49
NHLRC3-204ENST00000473371 PPP1R32Q7Z5V6 425 aa12.02□□□□□ -0.49
NHLRC3-204ENST00000473371 PKIBQ9C010 78 aa12.02□□□□□ -0.49
NHLRC3-204ENST00000473371 MRPS18CQ9Y3D5 142 aaKnown RBP12.02□□□□□ -0.49
NHLRC3-204ENST00000473371 GGCTO75223 188 aaKnown RBP12.01□□□□□ -0.49
NHLRC3-204ENST00000473371 SRP14P37108 136 aaKnown RBP12.01□□□□□ -0.49
NHLRC3-204ENST00000473371 MSMO1Q15800 293 aa12.01□□□□□ -0.49
NHLRC3-204ENST00000473371 ZNF124Q15973 351 aa12.01□□□□□ -0.49
NHLRC3-204ENST00000473371 KCNIP4Q6PIL6 250 aa12.01□□□□□ -0.49
NHLRC3-204ENST00000473371 CISD2Q8N5K1 135 aaKnown RBP12.01□□□□□ -0.49
NHLRC3-204ENST00000473371 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
NHLRC3-204ENST00000473371 B4E171 279 aa12.01□□□□□ -0.49
NHLRC3-204ENST00000473371 J3QT63 122 aa12.01□□□□□ -0.49
NHLRC3-204ENST00000473371 SYNGR4O95473 234 aa12.01□□□□□ -0.49
NHLRC3-204ENST00000473371 OR2H2O95918 312 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms