RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 FAM110DQ8TAY7 271 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-211ENST00000471260 CCDC107Q8WV48 283 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 TNFAIP8L1Q8WVP5 186 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 OR2A7Q96R45 310 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 ALX4Q9H161 411 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-211ENST00000471260 LINC00574Q9H8X3 128 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 IL36GQ9NZH8 169 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 SLC23A1Q9UHI7 598 aa10.84□□□□□ -0.67
HMGN1-211ENST00000471260 TRAV8-7A0A075B6U6 113 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 KBTBD11-OT1A0A1B0GTJ5 212 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 HMSDA8MTL9 139 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 SMLR1H3BR10 107 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 BUB1B-PAK6H3BSN5 160 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 TOR1AO14656 332 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 OPN1MWP04001 364 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 OPN1MW2P0DN77 364 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 OPN1MW3P0DN78 364 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 CGB3P0DN86 165 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 CGB7P0DN87 165 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 IGFBP3P17936 291 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-211ENST00000471260 SOX2P48431 317 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 TAS2R19P59542 299 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 ATXN7L3Q14CW9 347 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-211ENST00000471260 C17orf58Q2M2W7 97 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 HLA-DRB5Q30154 266 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 PAN3Q58A45 887 aaKnown RBP10.83□□□□□ -0.68
HMGN1-211ENST00000471260 NHLRC3Q5JS37 347 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 RAB12Q6IQ22 244 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 CCDC144NLQ6NUI1 221 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 CCDC28AQ8IWP9 274 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 IZUMO1Q8IYV9 350 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 OR10A7Q8NGE5 316 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 OR51A2Q8NGJ7 313 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 OR2T35Q8NGX2 323 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 OR9G1Q8NH87 305 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 WIPF2Q8TF74 440 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-211ENST00000471260 SLC25A21Q9BQT8 299 aaPredicted RBP10.83□□□□□ -0.68
HMGN1-211ENST00000471260 WNT10AQ9GZT5 417 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 METTL9Q9H1A3 318 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 IFT22Q9H7X7 185 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 PCDHB16Q9NRJ7 776 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 TAS2R4Q9NYW5 299 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 MGAT4CQ9UBM8 478 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 KIF25Q9UIL4 384 aa10.83□□□□□ -0.68
HMGN1-211ENST00000471260 TRAV24A0A0B4J272 114 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 FBXO24O75426 580 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 CSTBP04080 98 aaKnown RBP10.82□□□□□ -0.68
HMGN1-211ENST00000471260 LPLP06858 475 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 BDKRB2P30411 391 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 PRSS3P35030 304 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 ZNF93P35789 620 aaPredicted RBP10.82□□□□□ -0.68
HMGN1-211ENST00000471260 LPCAT3Q6P1A2 487 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 LINC00596Q86U02 117 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 TMEM229BQ8NBD8 167 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 GPX8Q8TED1 209 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 FAM3DQ96BQ1 224 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 S100A13Q99584 98 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 ZNF286AQ9HBT8 521 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 MED9Q9NWA0 146 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 ST3GAL6Q9Y274 331 aa10.82□□□□□ -0.68
HMGN1-211ENST00000471260 G3V3Q6 166 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 LY6LH3BQJ8 138 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 SHOXO15266 292 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 OR2F2O95006 317 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 HTR3BO95264 441 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 M6PRP20645 277 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 VDAC2P45880 294 aaPredicted RBP10.81□□□□□ -0.68
HMGN1-211ENST00000471260 CLDN12P56749 244 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 RAB14P61106 215 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 TSPAN5P62079 268 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 BLCAPP62952 87 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 HABP2Q14520 560 aaPredicted RBP10.81□□□□□ -0.68
HMGN1-211ENST00000471260 ARSJQ5FYB0 599 aaPredicted RBP10.81□□□□□ -0.68
HMGN1-211ENST00000471260 C1orf100Q5SVJ3 147 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 TPTE2P1Q5T6R2 138 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 NDUFA11Q86Y39 141 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 OSR2Q8N2R0 312 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 C11orf44Q8N8P7 122 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 OR11H4Q8NGC9 324 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 OR4C16Q8NGL9 310 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 KIRREL1Q96J84 757 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 CALYQ9NYX4 217 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 KLK11Q9UBX7 282 aa10.81□□□□□ -0.68
HMGN1-211ENST00000471260 AMMECR1Q9Y4X0 333 aaPredicted RBP10.81□□□□□ -0.68
HMGN1-211ENST00000471260 RPS10-NUDT3A0A1W2PQS6 291 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 NPIPB11E5RHQ5 1161 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 M0QZK8 103 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 HSPB6O14558 160 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 MAS1P04201 325 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 TBPP20226 339 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 GZMHP20718 246 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 HTR2CP28335 458 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 GLP1RP43220 463 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 OR3A4PP47883 348 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 MEF2DQ14814 521 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 MPV17LQ2QL34 196 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 PIGYQ3MUY2 71 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 LGALSLQ3ZCW2 172 aaPredicted RBP10.8□□□□□ -0.68
HMGN1-211ENST00000471260 THNSL2Q86YJ6 484 aa10.8□□□□□ -0.68
HMGN1-211ENST00000471260 OR4F17Q8NGA8 305 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms