RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 SMIM21Q3B7S5 101 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 CHRFAM7AQ494W8 412 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 LPCAT3Q6P1A2 487 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 REC114Q7Z4M0 266 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 MUC20Q8N307 709 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-208ENST00000468300 ERGIC1Q969X5 290 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 FYTTD1Q96QD9 318 aaKnown RBP6.88□□□□□ -1.31
BRCA1-208ENST00000468300 SCP2D1Q9UJQ7 156 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 TRDCB7Z8K6 153 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 G3V3Q6 166 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 SOD3P08294 240 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 DANCRP0C864 163 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 OR5H8P0DN80 308 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 ZBTB25P24278 435 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 FAM53AQ6NSI3 398 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-208ENST00000468300 MUC15Q8N387 334 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 SFT2D1Q8WV19 159 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 LRRC46Q96FV0 321 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 ZNF2Q9BSG1 426 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-208ENST00000468300 RANGRFQ9HD47 186 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-208ENST00000468300 PLSCR3Q9NRY6 295 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 NECAP2Q9NVZ3 263 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 RNF7Q9UBF6 113 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 NPTNQ9Y639 398 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 TMEM178BH3BS89 294 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 PRAF2O60831 178 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 TUSC2O75896 110 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 PSMB6P28072 239 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 MDH2P40926 338 aaKnown RBP6.88□□□□□ -1.31
BRCA1-208ENST00000468300 BLOC1S1P78537 153 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 AESQ08117 197 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 TESK1Q15569 626 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 HMGN3Q15651 99 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 FGFRL1Q8N441 504 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 ZNRF1Q8ND25 227 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 GAFA1Q96PS6 74 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 CABLES2Q9BTV7 478 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 ZNF286AQ9HBT8 521 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 SLC23A1Q9UHI7 598 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 PPP1R3CQ9UQK1 317 aa6.88□□□□□ -1.31
BRCA1-208ENST00000468300 TBL2Q9Y4P3 447 aaKnown RBP6.88□□□□□ -1.31
BRCA1-208ENST00000468300 USP9XQ93008 2570 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-208ENST00000468300 K7EQM0 130 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 TGOLN2O43493 480 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 IGLV2-14P01704 120 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 UCP1P25874 307 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 GLIPR1P48060 266 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 UBE2MP61081 183 aaKnown RBP6.87□□□□□ -1.31
BRCA1-208ENST00000468300 RBM39Q14498 530 aaKnown RBP6.87□□□□□ -1.31
BRCA1-208ENST00000468300 CR1LQ2VPA4 569 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 SLC35E4Q6ICL7 350 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 CDPF1Q6NVV7 123 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 PRSS57Q6UWY2 283 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 TCF23Q7RTU1 214 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 TMEM185AQ8NFB2 350 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 CCDC107Q8WV48 283 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 SDSLQ96GA7 329 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 FBN2P35556 2912 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 CRYBG3Q68DQ2 2970 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 ASH1LQ9NR48 2969 aaKnown RBP6.87□□□□□ -1.31
BRCA1-208ENST00000468300 TRBV6-7A0A0A0MS04 114 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 A0A1W2PPV4 95 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 SNRPGP15A8MWD9 76 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 FABP7O15540 132 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 PI3P19957 117 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 FPR2P25090 351 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 TNFRSF9Q07011 255 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 PPP1R1AQ13522 171 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 CD276Q5ZPR3 534 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 SPNS3Q6ZMD2 512 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 TPRX1Q8N7U7 411 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 BOLLQ8N9W6 283 aaKnown RBP6.87□□□□□ -1.31
BRCA1-208ENST00000468300 TCEAL7Q9BRU2 100 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 NBPF19A0A087WUL8 3843 aa6.87□□□□□ -1.31
BRCA1-208ENST00000468300 IGKV1D-13A0A0B4J2D9 117 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 C15orf65H3BRN8 121 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 K7N7A8 449 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 RLN1P04808 185 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 IGKV1-13P0DP09 117 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 AADACP22760 399 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 NFYAP23511 347 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-208ENST00000468300 HLA-DRB3P79483 266 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 DHRS2Q13268 280 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 ZNF788Q6ZQV5 615 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 DTX2Q86UW9 622 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 MITD1Q8WV92 249 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 RAB1CQ92928 201 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 MOB3AQ96BX8 217 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 ATG101Q9BSB4 218 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 DCTN5Q9BTE1 182 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 SAP30LQ9HAJ7 183 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 PIPOXQ9P0Z9 390 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 OR1A1Q9P1Q5 309 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 TENM4Q6N022 2769 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 NPIPB11E5RHQ5 1161 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 ST8SIA3O43173 380 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 DLEU1O43261 78 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 BRI3O95415 125 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 CGB3P0DN86 165 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 CGB7P0DN87 165 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms