RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 S1PR3Q99500 378 aa8.72□□□□□ -1.01
RTF1-202ENST00000462276 MARVELD1Q9BSK0 173 aa8.72□□□□□ -1.01
RTF1-202ENST00000462276 RSRP1Q9BUV0 290 aa8.72□□□□□ -1.01
RTF1-202ENST00000462276 TMPRSS13Q9BYE2 586 aa8.72□□□□□ -1.01
RTF1-202ENST00000462276 MMP28Q9H239 520 aa8.72□□□□□ -1.01
RTF1-202ENST00000462276 OCEL1Q9H607 264 aa8.72□□□□□ -1.01
RTF1-202ENST00000462276 C14orf166Q9Y224 244 aaKnown RBP8.72□□□□□ -1.01
RTF1-202ENST00000462276 MINOS1-NBL1R4GNA1 71 aa8.72□□□□□ -1.01
RTF1-202ENST00000462276 ITPR3Q14573 2671 aa8.71□□□□□ -1.01
RTF1-202ENST00000462276 IGHV3-43A0A0B4J1X8 118 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 RNF212BA8MTL3 300 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 OOSP1A8MZH6 123 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 TXNL1O43396 289 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 PRAF2O60831 178 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 IGHV3-43DP0DP04 118 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 EPHA1P21709 976 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 HTR1DP28221 377 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 GNRHRP30968 328 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 GPR12P47775 334 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 MECP2P51608 486 aaKnown RBP8.71□□□□□ -1.02
RTF1-202ENST00000462276 ZNF134P52741 427 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 FXYD4P59646 89 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 ABCA11PQ4W5N1 156 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 CCBE1Q6UXH8 406 aaPredicted RBP8.71□□□□□ -1.02
RTF1-202ENST00000462276 ZNF66Q6ZN08 573 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 KCTD9Q7L273 389 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 C5orf24Q7Z6I8 188 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 TCTEX1D1Q8N7M0 179 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 MARCH1Q8TCQ1 289 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 SECTM1Q8WVN6 248 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 TOMM40LQ969M1 308 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 ADTRPQ96IZ2 230 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 C18orf12Q96KH6 178 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 TBX15Q96SF7 602 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 HSD17B10Q99714 261 aaKnown RBP8.71□□□□□ -1.02
RTF1-202ENST00000462276 PCGF1Q9BSM1 259 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 IFI27L2Q9H2X8 130 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 SIRT7Q9NRC8 400 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 NUDT15Q9NV35 164 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 DPM3Q9P2X0 92 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 KCNIP3Q9Y2W7 256 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 TBL2Q9Y4P3 447 aaKnown RBP8.71□□□□□ -1.02
RTF1-202ENST00000462276 CSPG4Q6UVK1 2322 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 KIAA2026Q5HYC2 2103 aa8.71□□□□□ -1.02
RTF1-202ENST00000462276 DOCK11Q5JSL3 2073 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 IGKV1D-13A0A0B4J2D9 117 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 ODF3BA8MYP8 253 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 LEUTXA8MZ59 168 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 INMT-MINDY4F8WBC2 141 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 PEX14O75381 377 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 DHFRP00374 187 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 RLN1P04808 185 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 H2AFB2P0C5Z0 115 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 IGKV1-13P0DP09 117 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 LGALS4P56470 323 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 HLA-DRB5Q30154 266 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 TMEM128Q5BJH2 165 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 GPR157Q5UAW9 335 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 CCDC144NLQ6NUI1 221 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 SLC25A42Q86VD7 318 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 CENPSQ8N2Z9 138 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 PNKDQ8N490 385 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 CD300LFQ8TDQ1 290 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 MRGPRFQ96AM1 343 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 PARP12Q9H0J9 701 aaKnown RBP8.7□□□□□ -1.02
RTF1-202ENST00000462276 C20orf85Q9H1P6 137 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 OR2D2Q9H210 308 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 FAM212BQ9NTI7 297 aaPredicted RBP8.7□□□□□ -1.02
RTF1-202ENST00000462276 KCNS2Q9ULS6 477 aa8.7□□□□□ -1.02
RTF1-202ENST00000462276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.69□□□□□ -1.024e-6■■□□□ 13.3
RTF1-202ENST00000462276 RNASEK-C17orf49H0YIS7 233 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 BUB1B-PAK6H3BSN5 160 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 ST8SIA5O15466 376 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 CD5LO43866 347 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 IL5P05113 134 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 COX7A1P24310 79 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 GNG10P50151 68 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 ARHGDIBP52566 201 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 PIGPP57054 158 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 CATR1Q13166 79 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 HCP5Q6MZN7 132 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 ZNF833PQ6ZTB9 187 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 LDLRAD3Q86YD5 345 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 SGPP2Q8IWX5 399 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 LYG1Q8N1E2 194 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 DRAM1Q8N682 238 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 MAPK1IP1LQ8NDC0 245 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 NANPQ8TBE9 248 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 RTN4IP1Q8WWV3 396 aaPredicted RBP8.69□□□□□ -1.02
RTF1-202ENST00000462276 LEAP2Q969E1 77 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 ST6GALNAC6Q969X2 333 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 MALSU1Q96EH3 234 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 RTBDNQ9BSG5 229 aaPredicted RBP8.69□□□□□ -1.02
RTF1-202ENST00000462276 FXYD6Q9H0Q3 95 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 C5orf66Q9H5L9 145 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 GPN1Q9HCN4 374 aaPredicted RBP8.69□□□□□ -1.02
RTF1-202ENST00000462276 CCL28Q9NRJ3 127 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 SLC2A9Q9NRM0 540 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 RNF150Q9ULK6 438 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 VSIG4Q9Y279 399 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms