RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CDCP2Q5VXM1 449 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 KIRREL2Q6UWL6 708 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TBC1D26Q86UD7 250 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TMEM116Q8NCL8 245 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 SCAMP5Q8TAC9 235 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 MRAPQ8TCY5 172 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 APOBEC4Q8WW27 367 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 POM121L2Q96KW2 1035 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PAAF1Q9BRP4 392 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PRRG4Q9BZD6 226 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 CHRNA10Q9GZZ6 450 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TAAR3PQ9P1P4 343 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 MRM2Q9UI43 246 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 B9D1Q9UPM9 204 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TMED7-TICAM2A0A0A6YYA0 188 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 A0A0D9SEW6 157 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 A0A0J9YY10 115 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 IGLC7A0M8Q6 106 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 FEZF1A0PJY2 475 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 FFAR1O14842 300 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 NKX2-8O15522 239 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 MLNRO43193 412 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 IGLC2P0DOY2 106 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 IGLC3P0DOY3 106 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 IL3RAP26951 378 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 MRPL58Q14197 206 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 EDDM3AQ14507 147 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PRSS8Q16651 343 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 CLEC12BQ2HXU8 276 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ZNF766Q5HY98 468 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PAPPA-AS1Q5QFB9 102 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ALKAL1Q6UXT8 129 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ADAMTSL4Q6UY14 1074 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PQLC2Q6ZP29 291 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 C1orf122Q6ZSJ8 110 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 H1FNTQ75WM6 255 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 MEX3DQ86XN8 651 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 FBXL14Q8N1E6 418 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 WDR31Q8NA23 367 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 OR4D11Q8NGI4 311 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 OR10J6PQ8NGY7 276 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TAF15Q92804 592 aaKnown RBP eCLIP1.92□□□□□ -2.1
USP53-202ENST00000450251 RAB1CQ92928 201 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ZNF707Q96C28 371 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 ARHGAP5-AS1Q96IT6 56 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 GTSF1LQ9H1H1 148 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 UBE2ZQ9H832 354 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 GPR27Q9NS67 375 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 FRRS1LQ9P0K9 344 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ITGB4P16144 1822 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TRBV20-1A0A075B6N2 111 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PPIAL4EA0A075B759 164 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PROB1E7EW31 1015 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 HYPMO75409 117 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 CXCL14O95715 111 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PPP1R17O96001 155 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TNFP01375 233 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 PPIAL4FP0DN26 164 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 CRYBB3P26998 211 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 DRD3P35462 400 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 NMUP48645 174 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 RPS24P62847 133 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 RBX1P62877 108 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 YBX1P67809 324 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 PRDX1Q06830 199 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 RPL18Q07020 188 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 INSL4Q14641 139 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 EXOSC7Q15024 291 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 S100A7L2Q5SY68 101 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 DCAF12Q5T6F0 453 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 RBPMS2Q6ZRY4 209 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 TP53INP2Q8IXH6 220 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 C2orf73Q8N5S3 287 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 NFAM1Q8NET5 270 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 OR5AN1Q8NGI8 311 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 OR2T6Q8NHC8 308 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 C8orf46Q8TAG6 207 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ARPC1AQ92747 370 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 TMEM101Q96IK0 257 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ZNF479Q96JC4 524 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 C18orf12Q96KH6 178 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 LINC00615Q96LM1 132 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 KCNK17Q96T54 332 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 RNF126Q9BV68 326 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 AICDAQ9GZX7 198 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 C11orf68Q9H3H3 251 aaKnown RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 FNDC4Q9H6D8 234 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 GOLGA2P5Q9HBQ8 144 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 ANKRD10Q9NXR5 420 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 BOKQ9UMX3 212 aaPredicted RBP1.92□□□□□ -2.1
USP53-202ENST00000450251 PPIAL4AQ9Y536 164 aa1.92□□□□□ -2.1
USP53-202ENST00000450251 LINC01553A4QN01 128 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 JMJD7P0C870 316 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 NPPBP16860 134 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SRD5A2P31213 254 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 TFPI2P48307 235 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 PITX1P78337 314 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 PLAURQ03405 335 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 MESP2Q0VG99 397 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SRSF9Q13242 221 aaKnown RBP eCLIP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms