RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 OR6C3Q9NZP0 311 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 NAGKQ9UJ70 344 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 IGKV1D-13A0A0B4J2D9 117 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 A6NNC1 897 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 IGKV1-13P0DP09 117 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 COX6A1P12074 109 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 OR3A1P47881 315 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 GAGE1Q13065 139 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 SSPNQ14714 243 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 TMEM41BQ5BJD5 291 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 C10orf128Q5T292 105 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 OR5D13Q8NGL4 314 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 OR2T10Q8NGZ9 312 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 RAB40CQ96S21 281 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 IL36GQ9NZH8 169 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 EML6Q6ZMW3 1958 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 SLC22A20A6NK97 555 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 CRYABP02511 175 aaKnown RBP7.29□□□□□ -1.24
HPS4-206ENST00000439453 OR10J1P30954 320 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 CNN1P51911 297 aaKnown RBP7.29□□□□□ -1.24
HPS4-206ENST00000439453 RBM11P57052 281 aaKnown RBP7.29□□□□□ -1.24
HPS4-206ENST00000439453 MEF2BQ02080 365 aaPredicted RBP7.29□□□□□ -1.24
HPS4-206ENST00000439453 PCOLCEQ15113 449 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 ZNF774Q6NX45 483 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 CISD2Q8N5K1 135 aaKnown RBP7.29□□□□□ -1.24
HPS4-206ENST00000439453 ZNF525Q8N782 197 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 OR10J5Q8NHC4 309 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 RBM24Q9BX46 236 aaKnown RBP7.29□□□□□ -1.24
HPS4-206ENST00000439453 PLK3Q9H4B4 646 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 CCL28Q9NRJ3 127 aa7.29□□□□□ -1.24
HPS4-206ENST00000439453 A0A0G2JRQ6 117 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 LOC102725191A0A1B0GVB3 256 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 OR7C1O76099 320 aaPredicted RBP7.28□□□□□ -1.24
HPS4-206ENST00000439453 NRASP01111 189 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 SERF2P84101 59 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 ARL16Q0P5N6 197 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 FOXL2NBQ6ZUU3 175 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 ZNF573Q86YE8 665 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 RNF138Q8WVD3 245 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 LHX4Q969G2 390 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 IL22RA2Q969J5 263 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 TMEM54Q969K7 222 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 GPR146Q96CH1 333 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 H0Y980 276 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 TYMSP04818 313 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 PTGDSP41222 190 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 FOLR3P41439 243 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 RNPS1Q15287 305 aaKnown RBP7.28□□□□□ -1.24
HPS4-206ENST00000439453 LRRC75BQ2VPJ9 315 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 DEFB109BQ30KR1 87 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 METTL7AQ9H8H3 244 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 IGHV1-45A0A0A0MS14 117 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 KIAA1324LA8MWY0 1029 aaPredicted RBP7.28□□□□□ -1.24
HPS4-206ENST00000439453 DHHO43323 396 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 CNOT4O95628 575 aaKnown RBP7.28□□□□□ -1.24
HPS4-206ENST00000439453 SCTP09683 121 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 SRP14P37108 136 aaKnown RBP7.28□□□□□ -1.24
HPS4-206ENST00000439453 TLE1Q04724 770 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 BATF2Q8N1L9 274 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 PINX1Q96BK5 328 aaKnown RBP7.28□□□□□ -1.24
HPS4-206ENST00000439453 PARLQ9H300 379 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 SLC39A9Q9NUM3 307 aa7.28□□□□□ -1.24
HPS4-206ENST00000439453 IGLV3-32A0A0A0MS00 114 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 CELA2AP08217 269 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 LINC00614P0C842 121 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 S100GP29377 79 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 DAZAP2Q15038 168 aaPredicted RBP7.27□□□□□ -1.25
HPS4-206ENST00000439453 MRPL52Q86TS9 123 aaKnown RBP7.27□□□□□ -1.25
HPS4-206ENST00000439453 NFAM1Q8NET5 270 aaPredicted RBP7.27□□□□□ -1.25
HPS4-206ENST00000439453 OR2M3Q8NG83 312 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 TRBV11-1A0A0K0K1C0 115 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 TMEM250H0YL14 139 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 TP53I11O14683 189 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 PGLYRP1O75594 196 aaPredicted RBP7.27□□□□□ -1.25
HPS4-206ENST00000439453 HPRT1P00492 218 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 LCATP04180 440 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 FAM87AP0C7U9 286 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 IAPPP10997 89 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 CRYGSP22914 178 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 ZNF92Q03936 586 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 IZUMO4Q1ZYL8 232 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 TMEM42Q69YG0 159 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 Q6ZS49 121 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 HAPLN4Q86UW8 402 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 OR10G3Q8NGC4 313 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 MRPL30Q8TCC3 161 aaKnown RBP7.27□□□□□ -1.25
HPS4-206ENST00000439453 MS4A10Q96PG2 267 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 TBX15Q96SF7 602 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 MRPS18CQ9Y3D5 142 aaKnown RBP7.27□□□□□ -1.25
HPS4-206ENST00000439453 TENM4Q6N022 2769 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 RBMXL2O75526 392 aaKnown RBP7.27□□□□□ -1.25
HPS4-206ENST00000439453 TUSC2O75896 110 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 GYPAP02724 150 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 OTX2P32243 289 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 WNT5AP41221 380 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 PSMB3P49720 205 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 FUT6P51993 359 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 SOX8P57073 446 aa7.27□□□□□ -1.25
HPS4-206ENST00000439453 TESK1Q15569 626 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms